RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 TBC1D3BA6NDS4 549 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 BMP10O95393 424 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 NCF2P19878 526 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ELP6Q0PNE2 266 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CAMK2GQ13555 558 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LRRC32Q14392 662 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LONRF1Q17RB8 773 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LPCAT1Q8NF37 534 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 MAML1Q92585 1016 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 DTNBP1Q96EV8 351 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ABCF3Q9NUQ8 709 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 OR12D3Q9UGF7 316 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CDY1Q9Y6F8 540 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ZMYND10O75800 440 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 RB1P06400 928 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 PFKLP17858 780 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 GABRR2P28476 465 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 MIPP30301 263 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CASP2P42575 452 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 PTPN9P43378 593 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CARSP49589 748 aaKnown RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 MGAT5Q09328 741 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ASPSCR1Q9BZE9 553 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 TASP1Q9H6P5 420 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ANGPTL2Q9UKU9 493 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 GNGT2O14610 69 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ITGB6P18564 788 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ATXN3P54252 364 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CDH8P55286 799 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 DMC1Q14565 340 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 KBTBD12Q3ZCT8 623 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 OTOP3Q7RTS5 596 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 FAM228AQ86W67 206 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 TTC30BQ8N4P2 665 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CCNYL1Q8N7R7 359 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 VPS37AQ8NEZ2 397 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 PCDHA11Q9Y5I1 949 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 DDX3XO00571 662 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 WNT7AO00755 349 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 RAD51CO43502 376 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 PMPCBO75439 489 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 TADA3O75528 432 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 SLC8A1P32418 973 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 FBXL19Q6PCT2 694 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 AFTPHQ6ULP2 937 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ANKMY2Q8IV38 441 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 SCUBE3Q8IX30 993 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 WWOXQ9NZC7 414 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 VPS51Q9UID3 782 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 STXBP5LQ9Y2K9 1186 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 A0A088AWK7 358 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CCNDBP1O95273 360 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 STMN1P16949 149 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ZNF10P21506 573 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 YBEYP58557 167 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 PRKAA1Q13131 559 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 NAA25Q14CX7 972 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 TRIP4Q15650 581 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 KCTD16Q68DU8 428 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 PHOSPHO2Q8TCD6 241 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 RAD9AQ99638 391 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 SIKE1Q9BRV8 207 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 LRRC1Q9BTT6 524 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 HERC2P3Q9BVR0 1158 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 MYH2Q9UKX2 1941 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 SLC38A8A6NNN8 435 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 HNRNPA1P09651 372 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 MTHFRP42898 656 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 MAGEA11P43364 429 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 TP53BP2Q13625 1128 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ACOX1Q15067 660 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CCNI2Q6ZMN8 369 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 C3orf62Q6ZUJ4 267 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 RFX8Q6ZV50 586 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 STARD8Q92502 1023 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 RBM12Q9NTZ6 932 aaKnown RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 AHSPQ9NZD4 102 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 TLR5O60602 858 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 TSPAN3O60637 253 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-203ENST00000393287 SCNN1BP51168 640 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ZNF697Q5TEC3 545 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 ABHD8Q96I13 439 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 VPS50Q96JG6 964 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 WDR24Q96S15 920 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 BRD9Q9H8M2 597 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 DMAC2Q9NW81 257 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 SELENONQ9NZV5 590 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 GNPTGQ9UJJ9 305 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CHMP2BQ9UQN3 213 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 CDYLQ9Y232 598 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 FIS1Q9Y3D6 152 aa8.29□□□□□ -1.08
ATXN3-203ENST00000393287 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-203ENST00000393287 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms