RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ACMSDQ8TDX5 336 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 FAM111AQ96PZ2 611 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 LRRC37BQ96QE4 947 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 IQCGQ9H095 443 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 SEPT10Q9P0V9 454 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 GGT7Q9UJ14 662 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 ABT1Q9ULW3 272 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 NOD1Q9Y239 953 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 MGRN1O60291 552 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 UGT1A9O60656 530 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 AP2A1O95782 977 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 CRHR1P34998 444 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 GARSP41250 739 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 SERPINB4P48594 390 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 STXBP5Q5T5C0 1151 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 MAP3K21Q5TCX8 1036 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 C4orf50Q6ZRC1 276 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 ASRGL1Q7L266 308 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 RNF180Q86T96 592 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 TAC4Q86UU9 113 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 TP53INP2Q8IXH6 220 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 NPWQ8N729 165 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 DQX1Q8TE96 717 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 DEPDC1BQ8WUY9 529 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 CDKL2Q92772 493 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 PTPRN2Q92932 1015 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 HAPLN3Q96S86 360 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 TRIM56Q9BRZ2 755 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 C12orf65Q9H3J6 166 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 UGT1A7Q9HAW7 530 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 UGT1A10Q9HAW8 530 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 UGT1A8Q9HAW9 530 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 TRMT13Q9NUP7 481 aaKnown RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 ARHGEF38Q9NXL2 777 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 KLHL8Q9P2G9 620 aaPredicted RBP14.68□□□□□ -0.06
MKS1-203ENST00000393120 CHKBQ9Y259 395 aa14.68□□□□□ -0.06
MKS1-203ENST00000393120 WDR91A4D1P6 747 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 KCNK1O00180 336 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 LRIG2O94898 1065 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 MGAT1P26572 445 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 ACLYP53396 1101 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 ELF3P78545 371 aaPredicted RBP14.67□□□□□ -0.06
MKS1-203ENST00000393120 FAM189BP81408 668 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
MKS1-203ENST00000393120 BRMS1LQ5PSV4 323 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 KCTD11Q693B1 232 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 ITPRIPL1Q6GPH6 555 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 CDHR3Q6ZTQ4 885 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 CTU1Q7Z7A3 348 aaKnown RBP14.67□□□□□ -0.06
MKS1-203ENST00000393120 RAB3IL1Q8TBN0 382 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 DPF3Q92784 378 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 GORASP1Q9BQQ3 440 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 ARHGEF3Q9NR81 526 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 ABCC13Q9NSE7 274 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 INPP5FQ9Y2H2 1132 aa14.67□□□□□ -0.06
MKS1-203ENST00000393120 TMEM189-UBE2V1I3L0A0 370 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TNFRSF10BO14763 440 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 UNC5CO95185 931 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 POLBP06746 335 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 NQO1P15559 274 aaKnown RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 EPHB2P29323 1055 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 SESN2P58004 480 aaPredicted RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 DSC1Q08554 894 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 RIPK1Q13546 671 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 CRYMQ14894 314 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 DBN1Q16643 649 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TEX44Q53QW1 395 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 SPANXN3Q5MJ09 141 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 CASC4Q6P4E1 433 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 SLC24A5Q71RS6 500 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 PARP9Q8IXQ6 854 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 KLHDC8BQ8IXV7 354 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 NETO2Q8NC67 525 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TMEM209Q96SK2 561 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TSSK1BQ9BXA7 367 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 GBA3Q9H227 469 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 CASS4Q9NQ75 786 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TXLNGQ9NUQ3 528 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 RNF186Q9NXI6 227 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 CASP8AP2Q9UKL3 1982 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 MAGEB16A2A368 324 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 AP3B1O00203 1094 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 BIRC5O15392 142 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 OAZ2O95190 189 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 ITGB1P05556 798 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 COG7P83436 770 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 CAP1Q01518 475 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 SP3Q02447 781 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 YWHAHQ04917 246 aaPredicted RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 TRAF7Q6Q0C0 670 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 GLB1LQ6UWU2 654 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 RTN4RL1Q86UN2 441 aaPredicted RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 SPATA2LQ8IUW3 424 aaPredicted RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 ZSCAN18Q8TBC5 510 aaPredicted RBP14.66□□□□□ -0.06
MKS1-203ENST00000393120 KLHL29Q96CT2 875 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TSGA13Q96PP4 275 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 TRIM55Q9BYV6 548 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 CEP41Q9BYV8 373 aa14.66□□□□□ -0.06
MKS1-203ENST00000393120 MYLK2Q9H1R3 596 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms