RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 AUHQ13825 339 aaKnown RBP12.23□□□□□ -0.45
RFC4-202ENST00000392481 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 FIGNQ5HY92 759 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 ACBD5Q5T8D3 534 aaPredicted RBP12.23□□□□□ -0.45
RFC4-202ENST00000392481 TRNP1Q6NT89 227 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 FBXL22Q6P050 247 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 SERPINA13PQ6UXR4 307 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 BNIPLQ7Z465 357 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 TTC17Q96AE7 1141 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 SPACA7Q96KW9 195 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 TBCBQ99426 244 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 METTL5Q9NRN9 209 aaKnown RBP12.23□□□□□ -0.45
RFC4-202ENST00000392481 SEPT11Q9NVA2 429 aaKnown RBP12.23□□□□□ -0.45
RFC4-202ENST00000392481 ARHGEF38Q9NXL2 777 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 KIAA1522Q9P206 1035 aaPredicted RBP12.23□□□□□ -0.45
RFC4-202ENST00000392481 THADAQ6YHU6 1953 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 LAMA1P25391 3075 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 CACNA1AO00555 2505 aa12.23□□□□□ -0.45
RFC4-202ENST00000392481 A0A1B0GVM2 712 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 TCAF2A6NFQ2 919 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 H0Y626 953 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 ZNF217O75362 1048 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 ENDOD1O94919 500 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 EPN2O95208 641 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 ASLP04424 464 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 PRKCHP24723 683 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 OXCT1P55809 520 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 GSCP56915 257 aaPredicted RBP12.22□□□□□ -0.45
RFC4-202ENST00000392481 UBASH3AP57075 661 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
RFC4-202ENST00000392481 SPEM2Q0P670 501 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 PTPRNQ16849 979 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 FUT11Q495W5 492 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 C5orf22Q49AR2 442 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 FNDC3BQ53EP0 1204 aaKnown RBP12.22□□□□□ -0.45
RFC4-202ENST00000392481 FSCBQ5H9T9 825 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 PMS2CLQ68D20 193 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 MON1BQ7L1V2 547 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 CCAR2Q8N163 923 aaKnown RBP12.22□□□□□ -0.45
RFC4-202ENST00000392481 CYB5D2Q8WUJ1 264 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 RLN3Q8WXF3 142 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 MRGPRX1Q96LB2 322 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 C1orf74Q96LT6 269 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 CFAP57Q96MR6 1250 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
RFC4-202ENST00000392481 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 TTYH3Q9C0H2 523 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 TKTL2Q9H0I9 626 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 TMEM245Q9H330 911 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 PARD6AQ9NPB6 346 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 INTS6Q9UL03 887 aaKnown RBP12.22□□□□□ -0.45
RFC4-202ENST00000392481 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 PCDHGA5Q9Y5G8 931 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 HS3ST4Q9Y661 456 aa12.22□□□□□ -0.45
RFC4-202ENST00000392481 C2CD4BA6NLJ0 364 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 MAP3K13O43283 966 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 FOXD2O60548 495 aaPredicted RBP12.21□□□□□ -0.45
RFC4-202ENST00000392481 MOCS3O95396 460 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 EPHX1P07099 455 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 KRT3P12035 628 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 PDGFRAP16234 1089 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 TNFAIP3P21580 790 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 BCKDHBP21953 392 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 SDC4P31431 198 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 RDXP35241 583 aaKnown RBP12.21□□□□□ -0.45
RFC4-202ENST00000392481 PBX1P40424 430 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 CSKP41240 450 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 CAMK2GQ13555 558 aaPredicted RBP12.21□□□□□ -0.45
RFC4-202ENST00000392481 SLC12A1Q13621 1099 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 ASIC2Q16515 512 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 CSRP2Q16527 193 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 PITRM1Q5JRX3 1037 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 SPDYCQ5MJ68 293 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 SFMBT2Q5VUG0 894 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 PPP1R2P3Q6NXS1 205 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 PHLDB2Q86SQ0 1253 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
RFC4-202ENST00000392481 EMC1Q8N766 993 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 C3orf20Q8ND61 904 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 RXFP2Q8WXD0 754 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 IGSF8Q969P0 613 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 ERLEC1Q96DZ1 483 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 NUP58Q9BVL2 599 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 SIK2Q9H0K1 926 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 ARRDC1-AS1Q9H2J1 176 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 MBD1Q9UIS9 605 aaPredicted RBP12.21□□□□□ -0.45
RFC4-202ENST00000392481 USP18Q9UMW8 372 aa12.21□□□□□ -0.45
RFC4-202ENST00000392481 MUC22E2RYF6 1773 aaPredicted RBP12.2□□□□□ -0.46
RFC4-202ENST00000392481 SIGLEC16A6NMB1 481 aa12.2□□□□□ -0.46
RFC4-202ENST00000392481 I6L893 689 aaPredicted RBP12.2□□□□□ -0.46
RFC4-202ENST00000392481 CLDN11O75508 207 aa12.2□□□□□ -0.46
RFC4-202ENST00000392481 PRKCIP41743 596 aa12.2□□□□□ -0.46
RFC4-202ENST00000392481 PTPN9P43378 593 aa12.2□□□□□ -0.46
RFC4-202ENST00000392481 ATXN1P54253 815 aaKnown RBP12.2□□□□□ -0.46
RFC4-202ENST00000392481 ATP11AP98196 1134 aa12.2□□□□□ -0.46
RFC4-202ENST00000392481 LMNB2Q03252 620 aa12.2□□□□□ -0.46
RFC4-202ENST00000392481 PLEKHG6Q3KR16 790 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms