RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PSMG2Q969U7 264 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 RTP4Q96DX8 246 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 GKN1Q9NS71 199 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 DNMT3LQ9UJW3 386 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 OBSL1O75147 1896 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 MTCL1Q9Y4B5 1905 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 C2orf71A6NGG8 1288 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 TMEM63AO94886 807 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 IGLV3-27P01718 113 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 ADH1AP07327 375 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 CA3P07451 260 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC2A3P11169 496 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 ACTN2P35609 894 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 CREMQ03060 361 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 AUHQ13825 339 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 PDK1Q15118 436 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 PRKD1Q15139 912 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 SNX30Q5VWJ9 437 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 LILRA6Q6PI73 481 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 BZW1Q7L1Q6 419 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 GPR65Q8IYL9 337 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 TBC1D31Q96DN5 1066 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 P2RY11Q96G91 374 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 FAM129AQ9BZQ8 928 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 KLC2Q9H0B6 622 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 PRDM16Q9HAZ2 1276 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 MED4Q9NPJ6 270 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 RAB6BQ9NRW1 208 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 SSX2IPQ9Y2D8 614 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 KCNK1O00180 336 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 NRG2O14511 850 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 GRM6O15303 877 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 IVLP07476 585 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 IRF1P10914 325 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 LMAN1P49257 510 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 CAMK1Q14012 370 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 MORF4L2Q15014 288 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 ALS2CLQ60I27 953 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 NADSYN1Q6IA69 706 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 ARHGAP36Q6ZRI8 547 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 TFAP2DQ7Z6R9 452 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 PPIL6Q8IXY8 311 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 ZCCHC9Q8N567 271 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 ATP6V0D2Q8N8Y2 350 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 MRPL43Q8N983 215 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 NAT8LQ8N9F0 302 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 WBP2Q969T9 261 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 BTN2A3PQ96KV6 586 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 C1orf74Q96LT6 269 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■□□□ 11.8
SPTBN1-203ENST00000389980 CDC42EP4Q9H3Q1 356 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 CERS4Q9HA82 394 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 TLR9Q9NR96 1032 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 STK39Q9UEW8 545 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 SZT2Q5T011 3432 aa12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 NYNRINQ9P2P1 1898 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-203ENST00000389980 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 H0YGN5 161 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 DFFAO00273 331 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 PPP1R12AO14974 1030 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 CNTN5O94779 1100 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 METTL18O95568 372 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ACSL3O95573 720 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SHBGP04278 402 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 C8AP07357 584 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 HOXC13P31276 330 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 NUMBP49757 651 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ZNF135P52742 658 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC29A2Q14542 456 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 KYNUQ16719 465 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ALFQ53S48 1182 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 FBXL22Q6P050 247 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 PDZD4Q76G19 769 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 IGSF8Q969P0 613 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 C9orf72Q96LT7 481 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 PABPC3Q9H361 631 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 PAK5Q9P286 719 aa12.53□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC12A6Q9UHW9 1150 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms