RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 TACR2P21452 398 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 KCNJ1P48048 391 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 MAPKAPK2P49137 400 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 KCNQ1P51787 676 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 NDST2P52849 883 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 YBEYP58557 167 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 CYP4F8P98187 520 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 MLLT1Q03111 559 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 CALCOCO2Q13137 446 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 PIK3R6Q5UE93 754 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 DUPD1Q68J44 220 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 HEATR6Q6AI08 1181 aaKnown RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 TIGD7Q6NT04 549 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 FBXL22Q6P050 247 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 CCNI2Q6ZMN8 369 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 CEP128Q6ZU80 1094 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 GRASPQ7Z6J2 395 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 PCGF5Q86SE9 256 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 DENND1CQ8IV53 801 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 CMTM8Q8IZV2 173 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 VN1R2Q8NFZ6 395 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 ZNF707Q96C28 371 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 RPRD1AQ96P16 312 aaPredicted RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 OLFM3Q96PB7 478 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 PRMT1Q99873 361 aaKnown RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 SLC46A2Q9BY10 475 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 MAGEB5Q9BZ81 275 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 KIF9Q9HAQ2 790 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 PCDH9Q9HC56 1237 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 HAUS2Q9NVX0 235 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 TMEM248Q9NWD8 314 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 WHRNQ9P202 907 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 ASIC3Q9UHC3 531 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 DMGDHQ9UI17 866 aaKnown RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 VANGL2Q9ULK5 521 aa9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 MRPS23Q9Y3D9 190 aaKnown RBP9.11□□□□□ -0.95
RNU1-28P-201ENST00000383861 ARHGAP42A6NI28 874 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 SLC9A3R1O14745 358 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 MFSD11O43934 449 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CLDN11O75508 207 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 POU3F3P20264 500 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 ETFBP38117 255 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 ADCY8P40145 1251 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CDH4P55283 916 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 OXCT1P55809 520 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 GBE1Q04446 702 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 GALNT2Q10471 571 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 NAA30Q147X3 362 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TEAD2Q15562 447 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 P3H1Q32P28 736 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 PARP15Q460N3 678 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TCEAL5Q5H9L2 206 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 PRSS36Q5K4E3 855 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 MPP7Q5T2T1 576 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 RAP1GAP2Q684P5 730 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 NPNTQ6UXI9 565 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 Q6ZNB5 142 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CHST9Q7L1S5 443 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 GPR149Q86SP6 731 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 ZC3H18Q86VM9 953 aaKnown RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 NLRP14Q86W24 1093 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CCDC117Q8IWD4 279 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 FAM217AQ8IXS0 508 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 ZNF683Q8IZ20 524 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 LGI2Q8N0V4 545 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 UMODL1-AS1Q8N2C9 162 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CPXM2Q8N436 756 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 ZNF557Q8N988 423 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CCNYQ8ND76 341 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 FATE1Q969F0 183 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 HDAC11Q96DB2 347 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 OTUB2Q96DC9 234 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 RTP4Q96DX8 246 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 SNF8Q96H20 258 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 ZFRQ96KR1 1074 aaKnown RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TSGA13Q96PP4 275 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 PPP1R2P1Q96PQ5 205 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 QKIQ96PU8 341 aaKnown RBP eCLIP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 CYP2S1Q96SQ9 504 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 VAT1Q99536 393 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TMEM121Q9BTD3 319 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 FOXP3Q9BZS1 431 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 GKN1Q9NS71 199 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TDP1Q9NUW8 608 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 HCFC1R1Q9NWW0 138 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 SMPD4Q9NXE4 827 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 PAK5Q9P286 719 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TBC1D14Q9P2M4 693 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 SAE1Q9UBE0 346 aaPredicted RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 MTRF1LQ9UGC7 380 aaKnown RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 XPO7Q9UIA9 1087 aaKnown RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 AGO1Q9UL18 857 aaKnown RBP9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 NEU2Q9Y3R4 380 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 SNX10Q9Y5X0 201 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 GBF1Q92538 1859 aa9.1□□□□□ -0.95
RNU1-28P-201ENST00000383861 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.09□□□□□ -0.95
RNU1-28P-201ENST00000383861 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms