RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 CBWD1Q9BRT8 395 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 TARS2Q9BW92 718 aaKnown RBP3.95□□□□□ -1.78
SMC6-202ENST00000381272 TEKT3Q9BXF9 490 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 HAPLN2Q9GZV7 340 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 RANBP17Q9H2T7 1088 aaKnown RBP3.95□□□□□ -1.78
SMC6-202ENST00000381272 MTG2Q9H4K7 406 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 SLITRK6Q9H5Y7 841 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 VEZTQ9HBM0 779 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 ACP6Q9NPH0 428 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 FAM114A2Q9NRY5 505 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 POLR3BQ9NW08 1133 aaPredicted RBP3.95□□□□□ -1.78
SMC6-202ENST00000381272 COL20A1Q9P218 1284 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 CTTNBP2NLQ9P2B4 639 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 ATP8A1Q9Y2Q0 1164 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 TMX2Q9Y320 296 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 SNX24Q9Y343 169 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 UTP11Q9Y3A2 253 aaKnown RBP3.95□□□□□ -1.78
SMC6-202ENST00000381272 MRPL11Q9Y3B7 192 aaKnown RBP3.95□□□□□ -1.78
SMC6-202ENST00000381272 ALG6Q9Y672 507 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 FRMPD4Q14CM0 1322 aa3.95□□□□□ -1.78
SMC6-202ENST00000381272 TCRBV7S2A1N4TA0A589 114 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 SMIM23A6NLE4 172 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 A6NNZ2 444 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 PPIP5K2O43314 1243 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 CLSTN1O94985 981 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 AMHP03971 560 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 SHBGP04278 402 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 CHRNB2P17787 502 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 HSPA1LP34931 641 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 VAMP7P51809 220 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 PLTPP55058 493 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 BPIFB4P59827 614 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 PTENP60484 403 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 SMAD3P84022 425 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 MAP2K1Q02750 393 aaPredicted RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 IFFO1Q0D2I5 559 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 IFT88Q13099 833 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 PPP2R5AQ15172 486 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 PCBP1Q15365 356 aaKnown RBP eCLIP3.94□□□□□ -1.78
SMC6-202ENST00000381272 SLC15A2Q16348 729 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 KRT71Q3SY84 523 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 TUBB8Q3ZCM7 444 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 C1orf220Q5T0J3 134 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 EMC10Q5UCC4 262 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 DUPD1Q68J44 220 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 KIAA1841Q6NSI8 718 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 CPXCR1Q8N123 301 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 EIF1ADQ8N9N8 165 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 C1orf131Q8NDD1 294 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 SMC1BQ8NDV3 1235 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 MDM1Q8TC05 714 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.94□□□□□ -1.783e-6■■■■■ 50.8
SMC6-202ENST00000381272 RAPGEF5Q92565 580 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 C18orf8Q96DM3 657 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 TMEM176AQ96HP8 235 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ACCSQ96QU6 501 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ERP44Q9BS26 406 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 STRA6Q9BX79 667 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 PITHD1Q9GZP4 211 aaPredicted RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 TMEM39BQ9GZU3 492 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 VPS11Q9H270 941 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 VCPKMTQ9H867 229 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ZMAT4Q9H898 229 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 AGO3Q9H9G7 860 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 HOMER2Q9NSB8 354 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 TMOD2Q9NZR1 351 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 USP36Q9P275 1121 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 SEL1LQ9UBV2 794 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ZNF70Q9UC06 446 aaPredicted RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 HERC5Q9UII4 1024 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 ODF2LQ9ULJ1 636 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 TTC7AQ9ULT0 858 aaPredicted RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 DAAM1Q9Y4D1 1078 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 CAPN7Q9Y6W3 813 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ATP8B3O60423 1300 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 UBE4BO95155 1302 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 CNTNAP1P78357 1384 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ATRNL1Q5VV63 1379 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 LOXHD1Q8IVV2 1947 aa3.94□□□□□ -1.78
SMC6-202ENST00000381272 ZNFX1Q9P2E3 1918 aaKnown RBP3.94□□□□□ -1.78
SMC6-202ENST00000381272 A0A0A6YYJ9 748 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 C2orf78A6NCI8 922 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 GMNCA6NCL1 334 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 ANKRD63C9JTQ0 380 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 ENPP3O14638 875 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 KIAA0391O15091 583 aaKnown RBP3.93□□□□□ -1.78
SMC6-202ENST00000381272 SLC16A4O15374 487 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 CAND2O75155 1236 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 PPFIA2O75334 1257 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 ADRB2P07550 413 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 CCDC172P0C7W6 258 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 MYCLP12524 364 aaPredicted RBP3.93□□□□□ -1.78
SMC6-202ENST00000381272 ALAS1P13196 640 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 C6P13671 934 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 VCAM1P19320 739 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 TACR2P21452 398 aa3.93□□□□□ -1.78
SMC6-202ENST00000381272 HNRNPH1P31943 449 aaKnown RBP3.93□□□□□ -1.78
SMC6-202ENST00000381272 RPL21P46778 160 aaKnown RBP3.93□□□□□ -1.78
SMC6-202ENST00000381272 KCNJ1P48048 391 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms