RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 O00370 1275 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
VCX3A-201ENST00000381089 RNASEH2AO75792 299 aaKnown RBP16.6■□□□□ 0.25
VCX3A-201ENST00000381089 LDOC1O95751 146 aaPredicted RBP16.6■□□□□ 0.25
VCX3A-201ENST00000381089 IGHV4-34P06331 123 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 C1SP09871 688 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 JUPP14923 745 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 ABCG1P45844 678 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 SGSHP51688 502 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 TBX4P57082 545 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 CDH18Q13634 790 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 STILQ15468 1287 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 MARCH9Q86YJ5 346 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 ZC3H3Q8IXZ2 948 aaKnown RBP16.6■□□□□ 0.25
VCX3A-201ENST00000381089 OR2T34Q8NGX1 318 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 TTC17Q96AE7 1141 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 SLC6A18Q96N87 628 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 DCBLD2Q96PD2 775 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 GDF3Q9NR23 364 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 RMND1Q9NWS8 449 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 FZD4Q9ULV1 537 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
VCX3A-201ENST00000381089 SMG1Q96Q15 3661 aaKnown RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 TARSL2A2RTX5 802 aaKnown RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 ENC1O14682 589 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 SIN3BO75182 1162 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 FBXO21O94952 628 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 IGLV3-27P01718 113 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 LTFP02788 710 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 PAEPP09466 180 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CD38P28907 300 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CSKP41240 450 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 ARRB1P49407 418 aaPredicted RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 GALCP54803 685 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CST6Q15828 149 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 FAM133BQ5BKY9 247 aaKnown RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 KCNT1Q5JUK3 1230 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 RNF219Q5W0B1 726 aaPredicted RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 NCEH1Q6PIU2 408 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 LCLAT1Q6UWP7 414 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 DHX40Q8IX18 779 aaKnown RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CARNMT1Q8N4J0 409 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 WFDC5Q8TCV5 224 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 CNDP2Q96KP4 475 aaKnown RBP16.59■□□□□ 0.25
VCX3A-201ENST00000381089 SERPINB11Q96P15 392 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 ORAI3Q9BRQ5 295 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 KNTC1P50748 2209 aa16.59■□□□□ 0.25
VCX3A-201ENST00000381089 EDDM13A0A1B0GTR0 161 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 GOLGA6L7A0A1B0GV03 622 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 A0A1W2PP55 124 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 MID1O15344 667 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 RFPL3O75679 317 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 SRPRAP08240 638 aaKnown RBP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 SLC6A4P31645 630 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 RGS7P49802 495 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 TMEM270Q6UE05 265 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 LRRC69Q6ZNQ3 347 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 SND1Q7KZF4 910 aaKnown RBP eCLIP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 GATAD2AQ86YP4 633 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 MMAAQ8IVH4 418 aaKnown RBP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 OXR1Q8N573 874 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 HSFY1Q96LI6 401 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 UBL7Q96S82 380 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 NEUROG2Q9H2A3 272 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 ADAMTS1Q9UHI8 967 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
VCX3A-201ENST00000381089 COL5A1P20908 1838 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-201ENST00000381089 A0A1W2PQ27 194 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 A0A1W2PQ64 194 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 M0QYV0 167 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 PLK4O00444 970 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
VCX3A-201ENST00000381089 ZNF202O95125 648 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 ADH1BP00325 375 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 SLC8A1P32418 973 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 NNMTP40261 264 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 CCR5P51681 352 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 LRMPQ12912 555 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 NNTQ13423 1086 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 PKDCCQ504Y2 493 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 PITRM1Q5JRX3 1037 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
VCX3A-201ENST00000381089 SLC35F5Q8WV83 523 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 MYO19Q96H55 970 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 TRIM62Q9BVG3 475 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 MTG2Q9H4K7 406 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 SERGEFQ9UGK8 458 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
VCX3A-201ENST00000381089 ERVW-1Q9UQF0 538 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 PCDHB4Q9Y5E5 795 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 AK5Q9Y6K8 562 aa16.57■□□□□ 0.24
VCX3A-201ENST00000381089 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
VCX3A-201ENST00000381089 PIK3R2O00459 728 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms