RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TAF10Q12962 218 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 USP41Q3LFD5 358 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 ARTNQ5T4W7 220 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 FOXR1Q6PIV2 292 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 C2orf15Q8WU43 125 aaKnown RBP20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 IGSF21Q96ID5 467 aa20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 CELF6Q96J87 481 aaKnown RBP20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 INTS9Q9NV88 658 aaKnown RBP20.4■□□□□ 0.86
PDLIM5-205ENST00000380180 TMEM120BA0PK00 339 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 WDR27A2RRH5 827 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 TBX18O95935 607 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 BRAFP15056 766 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 PSMB4P28070 264 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 RASA2Q15283 850 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 PKN2Q16513 984 aaKnown RBP20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 KLHL38Q2WGJ6 581 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 RASIP1Q5U651 963 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 MANEALQ5VSG8 457 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 PDCD7Q8N8D1 485 aaKnown RBP20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 ATXN2LQ8WWM7 1075 aaKnown RBP20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 TOP1MTQ969P6 601 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 CFAP36Q96G28 342 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 SLC39A13Q96H72 371 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 SIGLEC10Q96LC7 697 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 KCNK9Q9NPC2 374 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 TLR8Q9NR97 1041 aaKnown RBP20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 CLIC5Q9NZA1 410 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 PSMC3IPQ9P2W1 217 aaPredicted RBP20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 MTRRQ9UBK8 725 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 ACTL7BQ9Y614 415 aa20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 NYNRINQ9P2P1 1898 aaKnown RBP20.39■□□□□ 0.86
PDLIM5-205ENST00000380180 MKI67P46013 3256 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 TCRBV9S1A1TA0A576 114 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 GMNCA6NCL1 334 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 ZNF189O75820 626 aaPredicted RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 RPL17P18621 184 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 HOXC13P31276 330 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 TBX4P57082 545 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 RPL10AP62906 217 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 SARNPP82979 210 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 CDK16Q00536 496 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 EFEMP1Q12805 493 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 SLC8B1Q6J4K2 584 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 TMCO2Q7Z6W1 182 aaPredicted RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 TRABD2AQ86V40 505 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 GIPC2Q8TF65 315 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 LRRC39Q96DD0 335 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 PAFAH2Q99487 392 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 XAB2Q9HCS7 855 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 KLHL8Q9P2G9 620 aaPredicted RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 IGSF9Q9P2J2 1179 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 ZC3H7BQ9UGR2 993 aaKnown RBP20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 HS3ST4Q9Y661 456 aa20.39■□□□□ 0.85
PDLIM5-205ENST00000380180 SPAG6O75602 509 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 HTR7P34969 479 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 OR1D2P34982 312 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 RFC2P35250 354 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 PSEN1P49768 467 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 MLLT6P55198 1093 aaPredicted RBP20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 NR1H3Q13133 447 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 PSMD5Q16401 504 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 LRRC26Q2I0M4 334 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 NLRP14Q86W24 1093 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 RNF168Q8IYW5 571 aaPredicted RBP20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 TBC1D31Q96DN5 1066 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 PAWRQ96IZ0 340 aaKnown RBP20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 CYTH2Q99418 400 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 DHRS4Q9BTZ2 278 aa20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 EIF2B3Q9NR50 452 aaKnown RBP20.38■□□□□ 0.85
PDLIM5-205ENST00000380180 NDUFAB1O14561 156 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 MTSS1O43312 755 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 SLC2A3P11169 496 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 KRT15P19012 456 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 ITGB8P26012 769 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 GJA8P48165 433 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 TUBP50607 506 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 HNRNPH2P55795 449 aaKnown RBP20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 MPP2Q14168 576 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 SPOUT1Q5T280 376 aaKnown RBP20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 FAM117BQ6P1L5 589 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 ADGRD1Q6QNK2 874 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 C14orf80Q86SX3 495 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 MPP5Q8N3R9 675 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 C1orf74Q96LT6 269 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 CCT8L2Q96SF2 557 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 CATSPERBQ9H7T0 1116 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 PLAC1Q9HBJ0 212 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 TMEM51Q9NW97 253 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 COMMD8Q9NX08 183 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 E9PAM4 449 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 C2CD2LO14523 706 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 FGF10O15520 208 aaPredicted RBP20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 ATF6P18850 670 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 MSH2P43246 934 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 KBTBD12Q3ZCT8 623 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 PIK3R6Q5UE93 754 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 KIAA1841Q6NSI8 718 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 EBNA1BP2Q99848 306 aaKnown RBP20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 OLA1Q9NTK5 396 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms