RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 PRPF39Q86UA1 669 aaKnown RBP15.47■□□□□ 0.07
SNX2-201ENST00000379516 HDAC11Q96DB2 347 aa15.47■□□□□ 0.07
SNX2-201ENST00000379516 FCRL2Q96LA5 508 aaPredicted RBP15.47■□□□□ 0.07
SNX2-201ENST00000379516 SERPINB11Q96P15 392 aa15.47■□□□□ 0.07
SNX2-201ENST00000379516 EBNA1BP2Q99848 306 aaKnown RBP15.47■□□□□ 0.07
SNX2-201ENST00000379516 GMIPQ9P107 970 aa15.47■□□□□ 0.07
SNX2-201ENST00000379516 TTLL3Q9Y4R7 772 aa15.47■□□□□ 0.07
SNX2-201ENST00000379516 PATJQ8NI35 1801 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 MTMR11A4FU01 709 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 INHBAP08476 426 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 VIMP08670 466 aaKnown RBP15.46■□□□□ 0.07
SNX2-201ENST00000379516 TLE2Q04725 743 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 GPR17Q13304 367 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 PPP2R5DQ14738 602 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 TRIM60Q495X7 471 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 UNC5AQ6ZN44 842 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 LRRC34Q8IZ02 419 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 ARHGAP18Q8N392 663 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 SEPT5Q99719 369 aaPredicted RBP15.46■□□□□ 0.07
SNX2-201ENST00000379516 PLAC1Q9HBJ0 212 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 EIF2B3Q9NR50 452 aaKnown RBP15.46■□□□□ 0.07
SNX2-201ENST00000379516 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.07
SNX2-201ENST00000379516 H7C4K7 107 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 YWHAQP27348 245 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 LRRC8BQ6P9F7 803 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 CTAGE3PQ8IX95 158 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 LRRC43Q8N309 656 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 SPPL2BQ8TCT7 592 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 BCL7CQ8WUZ0 217 aaPredicted RBP15.46■□□□□ 0.06
SNX2-201ENST00000379516 SLC44A1Q8WWI5 657 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 FBXO32Q969P5 355 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 TRIM56Q9BRZ2 755 aaKnown RBP15.46■□□□□ 0.06
SNX2-201ENST00000379516 TTPALQ9BTX7 342 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 NEU3Q9UQ49 428 aa15.46■□□□□ 0.06
SNX2-201ENST00000379516 ZNF638Q14966 1978 aaKnown RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 TET1Q8NFU7 2136 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 KCNU1A8MYU2 1149 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 TRDMT1O14717 391 aaKnown RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 PRPF4O43172 522 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNX2-201ENST00000379516 MTSS1O43312 755 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 TBC1D4O60343 1298 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 APOEP02649 317 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 MLNP12872 115 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 KRT4P19013 534 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 GBP2P32456 591 aaPredicted RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 PRSS55Q6UWB4 352 aaPredicted RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNX2-201ENST00000379516 ANKS3Q6ZW76 656 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 PPM1NQ8N819 430 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 CKAP2Q8WWK9 683 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 AGAP3Q96P47 875 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 PAIP2Q9BPZ3 127 aaKnown RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 CRISPLD1Q9H336 500 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 PIH1D1Q9NWS0 290 aaKnown RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 IL37Q9NZH6 218 aa15.45■□□□□ 0.06
SNX2-201ENST00000379516 SMG5Q9UPR3 1016 aaKnown RBP15.45■□□□□ 0.06
SNX2-201ENST00000379516 IQANK1A0A1B0GTG1 560 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 DFFAO00273 331 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 ZBTB24O43167 697 aaPredicted RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 GSTA2P09210 222 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 ALDH7A1P49419 539 aaKnown RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 SESN2P58004 480 aaPredicted RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 EFEMP1Q12805 493 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 ZBTB17Q13105 803 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 DUSP4Q13115 394 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 SPARCL1Q14515 664 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 GKAP1Q5VSY0 366 aaPredicted RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 MSANTD2Q6P1R3 559 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 MZB1Q8WU39 189 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 SGSM3Q96HU1 749 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 SEC16BQ96JE7 1060 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 CATSPERBQ9H7T0 1116 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 TLR6Q9Y2C9 796 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 PCDHA11Q9Y5I1 949 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 HS3ST4Q9Y661 456 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 MRPL42Q9Y6G3 142 aaKnown RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 VWA8A3KMH1 1905 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 SDR42E2A6NKP2 422 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 CXorf49A8MYA2 514 aaPredicted RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 TCP11X1B4DZS4 312 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 RTN3O95197 1032 aaPredicted RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 VNN2O95498 520 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 C1QAP02745 245 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 CA4P22748 312 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 PRKCHP24723 683 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 HTR7P34969 479 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 RPA3P35244 121 aaPredicted RBP15.44■□□□□ 0.06
SNX2-201ENST00000379516 TUBP50607 506 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 TBX4P57082 545 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 CRADDP78560 199 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 COG7P83436 770 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 TAF10Q12962 218 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 TEX44Q53QW1 395 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 SLC26A11Q86WA9 606 aa15.44■□□□□ 0.06
SNX2-201ENST00000379516 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms