RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 I6L893 689 aaPredicted RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 PJA2O43164 708 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 CLDN11O75508 207 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 LUC7L3O95232 432 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 KAT7O95251 611 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 PTMAP06454 111 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 L1CAMP32004 1257 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 HTR7P34969 479 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 SLC1A1P43005 524 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 NOP2P46087 812 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 RPS9P46781 194 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 SLC6A11P48066 632 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 ZNF135P52742 658 aaPredicted RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 RPS24P62847 133 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 KIF5AQ12840 1032 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 CDH18Q13634 790 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 CCINQ13939 588 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 CWF19L1Q69YN2 538 aaKnown RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
PCNA-201ENST00000379143 C12orf40Q86WS4 652 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 MFN1Q8IWA4 741 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 FBXL6Q8N531 539 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 ARFGAP1Q8N6T3 406 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 TERB1Q8NA31 727 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 FIBINQ8TAL6 211 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 BTBD6Q96KE9 485 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 PPP1R9BQ96SB3 815 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 FOXQ1Q9C009 403 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 STIM2Q9P246 746 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 PCSK1NQ9UHG2 260 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 AP4E1Q9UPM8 1137 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 DMDP11532 3685 aa12.3□□□□□ -0.44
PCNA-201ENST00000379143 TBC1D3BA6NDS4 549 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 H0Y626 953 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 PDGFBP01127 241 aaPredicted RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 CISD3P0C7P0 127 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CHRNB1P11230 501 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 SGSHP51688 502 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CDH4P55283 916 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 SLC12A1Q13621 1099 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 MESDQ14696 234 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 EIF4HQ15056 248 aaKnown RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 IFI16Q16666 785 aaKnown RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CHST9Q7L1S5 443 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 ZNF683Q8IZ20 524 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CCAR2Q8N163 923 aaKnown RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CFAP52Q8N1V2 620 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 PHTF2Q8N3S3 785 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 ACRBPQ8NEB7 543 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 TEKT4Q8WW24 435 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 IGSF8Q969P0 613 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 CLDN23Q96B33 292 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 EPAS1Q99814 870 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 ZYG11BQ9C0D3 744 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 LMAN1LQ9HAT1 526 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 FBRSL1Q9HCM7 1045 aaKnown RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 DONSONQ9NYP3 566 aa12.29□□□□□ -0.44
PCNA-201ENST00000379143 KIAA1522Q9P206 1035 aaPredicted RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 REXO2Q9Y3B8 237 aaKnown RBP12.29□□□□□ -0.44
PCNA-201ENST00000379143 MYOFQ9NZM1 2061 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 TIMM44O43615 452 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 LRIG2O94898 1065 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 KRT7P08729 469 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 CCDC175P0C221 793 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 GGCXP38435 758 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 SSR1P43307 286 aaKnown RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 CCZ1BP86790 482 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 KDSRQ06136 332 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 ZNF177Q13360 481 aaPredicted RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 MANEALQ5VSG8 457 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 NAIF1Q69YI7 327 aaPredicted RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 C14orf80Q86SX3 495 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 AHI1Q8N157 1196 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 CARNMT1Q8N4J0 409 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.28□□□□□ -0.445e-6■■□□□ 13.3
PCNA-201ENST00000379143 WFIKKN2Q8TEU8 576 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 UCMAQ8WVF2 138 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 P2RY11Q96G91 374 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 DESI2Q9BSY9 194 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 TSGA10Q9BZW7 698 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
PCNA-201ENST00000379143 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 STARD13Q9Y3M8 1113 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 MTF2Q9Y483 593 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms