RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 GRIP2Q9C0E4 1043 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 XYLT2Q9H1B5 865 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 FRMD4BQ9Y2L6 1034 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 LRCH1Q9Y2L9 728 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 MYADML2A6NDP7 307 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PQBP1O60828 265 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ZC3H11AO75152 810 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■■■■□ 19.7
GPCPD1-201ENST00000379019 BAG2O95816 211 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PDGFRBP09619 1106 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SMIM10L2AP0DMW4 78 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SMIM10L2BP0DMW5 78 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 MYL6P60660 151 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 OSTNP61366 133 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 AP1ARQ63HQ0 302 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ABHD15Q6UXT9 468 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 MFSD6LQ8IWD5 586 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 UBL4BQ8N7F7 174 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TRAPPC12Q8WVT3 735 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TSSK1BQ9BXA7 367 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 NIFKQ9BYG3 293 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 MTMR12Q9C0I1 747 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ACSS3Q9H6R3 686 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SAR1AQ9NR31 198 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 DNMT3BQ9UBC3 853 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 USP22Q9UPT9 525 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PLXNA4Q9HCM2 1894 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TRIM43BA6NCK2 446 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 B4GALT4O60513 344 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ARIH2O95376 493 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 XRCC1P18887 633 aaPredicted RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 POU3F3P20264 500 aaPredicted RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ITGAXP20702 1163 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SSR1P43307 286 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 QARSP47897 775 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ADAM17P78536 824 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF460Q14592 562 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 LY6KQ17RY6 165 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 AAK1Q2M2I8 961 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TRIM71Q2Q1W2 868 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC9A4Q6AI14 798 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 CHRDL2Q6WN34 429 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 UTS2BQ765I0 119 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 AMIGO2Q86SJ2 522 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TICAM1Q8IUC6 712 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PLD5Q8N7P1 536 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 FBXL13Q8NEE6 735 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TRIM43Q96BQ3 446 aaPredicted RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PCYT2Q99447 389 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF302Q9NR11 478 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 GOLGA8QA0A0J9YX86 632 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 GOLGA8OA6NCC3 632 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 GOLGA8NF8WBI6 632 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PPEF2O14830 753 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 VCLP18206 1134 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF132P52740 706 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PKNOX1P55347 436 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 GBE1Q04446 702 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC18A2Q05940 514 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PCLAFQ15004 111 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 KATNAL2Q8IYT4 538 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 GDPD5Q8WTR4 605 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 MAIP1Q8WWC4 291 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PPP1R16BQ96T49 567 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 POMPQ9Y244 141 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 GOLGA6L10A0A0M3HER8 536 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 SGK1O00141 431 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 DGKIO75912 1065 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PGM1P36871 562 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ACTR2P61160 394 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 STRN3Q13033 797 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 KCNJ11Q14654 390 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PSMD6Q15008 389 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 IYDQ6PHW0 289 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TAOK1Q7L7X3 1001 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF410Q86VK4 478 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TDRPQ86YL5 185 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 KCNN1Q92952 543 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 PCDHAC1Q9H158 963 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 ANKEF1Q9NU02 776 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 MTRF1LQ9UGC7 380 aaKnown RBP7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 DOLKQ9UPQ8 538 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 TRPV2Q9Y5S1 764 aa7.57□□□□□ -1.2
GPCPD1-201ENST00000379019 RFXAPO00287 272 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 USP12O75317 370 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 C1QCP02747 245 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 ASLP04424 464 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 POLR2IP36954 125 aaKnown RBP7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 CETN2P41208 172 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 STAT5BP51692 787 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 CLDN10P78369 228 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 CEACAM7Q14002 265 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 CHI3L2Q15782 390 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 XKR3Q5GH77 459 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF697Q5TEC3 545 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 RBM44Q6ZP01 1051 aaKnown RBP7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 ARHGEF18Q6ZSZ5 1173 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 FAM172AQ8WUF8 416 aa7.56□□□□□ -1.2
GPCPD1-201ENST00000379019 NAT14Q8WUY8 206 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms