RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 B4GALT5O43286 388 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 CPA3P15088 417 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 RPL22P35268 128 aaKnown RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 MTA1Q13330 715 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 POU6F1Q14863 301 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 TJAP1Q5JTD0 557 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 N4BP2L1Q5TBK1 243 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 PHF13Q86YI8 300 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 ALLCQ8N6M5 410 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 SMPD4Q9NXE4 827 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 GGA2Q9UJY4 613 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 WDR27A2RRH5 827 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 RTN3O95197 1032 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 ITGALP20701 1170 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 MMP13P45452 471 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 KCNJ2P63252 427 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 MRPS6P82932 125 aaKnown RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 CES3Q6UWW8 571 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 ZCCHC23Q6ZST2 131 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 GPR141Q7Z602 305 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 WNT8BQ93098 351 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 CLPBQ9H078 707 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 IL1RL2Q9HB29 575 aa15.36■□□□□ 0.05
NPHP4-201ENST00000378156 AJAP1Q9UKB5 411 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-201ENST00000378156 RNF103O00237 685 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 ALBP02768 609 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 MYL4P12829 197 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 ATP6V1B1P15313 513 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SP3Q02447 781 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 LRRC38Q5VT99 294 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 APBA2Q99767 749 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 STMN3Q9NZ72 180 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 RNF112Q9ULX5 631 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 GLP2RO95838 553 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 KCNK10P57789 538 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 BTKQ06187 659 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 MTMR14Q8NCE2 650 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SNRNP27Q8WVK2 155 aaKnown RBP15.35■□□□□ 0.05
NPHP4-201ENST00000378156 TUBGCP3Q96CW5 907 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SLC25A13Q9UJS0 675 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SYNDIG1LA6NDD5 238 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 FKBP6O75344 327 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 ZCCHC18P0CG32 403 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 PPP3CCP48454 512 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-201ENST00000378156 ANKS3Q6ZW76 656 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 BSNDQ8WZ55 320 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 INPP5DQ92835 1189 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 FAM136AQ96C01 138 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 CIPCQ9C0C6 399 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 TKTL2Q9H0I9 626 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SYTL2Q9HCH5 934 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 GPAMQ9HCL2 828 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SLCO1B3Q9NPD5 702 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 NMRK2Q9NPI5 230 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 DPP7Q9UHL4 492 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 FAM32AQ9Y421 112 aaKnown RBP15.35■□□□□ 0.05
NPHP4-201ENST00000378156 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 FANCGO15287 622 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 TPH1P17752 444 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 EMILIN2Q9BXX0 1053 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 ZNF556Q9HAH1 456 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 SIX2Q9NPC8 291 aa15.35■□□□□ 0.05
NPHP4-201ENST00000378156 HACD1B0YJ81 288 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 RBP1P09455 135 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 NPR3P17342 541 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 MGAT1P26572 445 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 ITGA9Q13797 1035 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 DUSP28Q4G0W2 176 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 TTC27Q6P3X3 843 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 TNIP2Q8NFZ5 429 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 LRRC15Q8TF66 581 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 TOPAZ1Q8N9V7 1692 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 GRK2P25098 689 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 APBB2Q92870 758 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 OXNAD1Q96HP4 312 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 ATP13A1Q9HD20 1204 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 GIMAP4Q9NUV9 329 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 LZTS3O60299 673 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 RASSF9O75901 435 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 ZNF143P52747 638 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 SPDYE7PQ495Y7 208 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 PTAR1Q7Z6K3 402 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 PIGZQ86VD9 579 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 JADE3Q92613 823 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 FAR2Q96K12 515 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 BTBD10Q9BSF8 475 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 UNKQ9C0B0 810 aaKnown RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 COL20A1Q9P218 1284 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 NUDT5Q9UKK9 219 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 hCG_1818297A0A087WSY0 165 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 A0A0B4J269 797 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 GOLGA8TH3BQL2 631 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 SHOX2O60902 331 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 ARF4P18085 180 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms