RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CBX6O95503 412 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SERPINF2P08697 491 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TRIM60Q495X7 471 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 BHMTQ93088 406 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ULBP1Q9BZM6 244 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 KCNK4Q9NYG8 393 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 E7ENQ6 273 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 DDX3YO15523 660 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 RAMP2O60895 175 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 AKR1A1P14550 325 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ITGALP20701 1170 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 CSE1LP55060 971 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TAS2R40P59535 323 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 FUT11Q495W5 492 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 IZUMO2Q6UXV1 221 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 KIAA0319LQ8IZA0 1049 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 WDR48Q8TAF3 677 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SEMA4DQ92854 862 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 CDK5RAP1Q96SZ6 601 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NDUFA13Q9P0J0 144 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 C2CD2Q9Y426 696 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SNX13Q9Y5W8 968 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ERI2A8K979 691 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ATP6V1B1P15313 513 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TBL1YQ9BQ87 522 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 EXOSC4Q9NPD3 245 aaKnown RBP19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SCN3BQ9NY72 215 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 RAD54BQ9Y620 910 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SNCAIPQ9Y6H5 919 aa19.12■□□□□ 0.65
CNTNAP3B-203ENST00000377561 A0A0B4J269 797 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PRKCQQ04759 706 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 GALNTL6Q49A17 601 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 P3H2Q8IVL5 708 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 DIS3LQ8TF46 1054 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 DDI1Q8WTU0 396 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 FAM136AQ96C01 138 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SNRNP25Q9BV90 132 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 MMADHCQ9H3L0 296 aaPredicted RBP19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NRCAMQ92823 1304 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 VAPBO95292 243 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NFYCQ13952 458 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 GPRC5DQ9NZD1 345 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TRPV2Q9Y5S1 764 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 KDM4FA0A1W2PPD8 638 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PTPN1P18031 435 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SLC34A1Q06495 639 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 AGKQ53H12 422 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 C11orf96Q7Z7L8 435 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 CARNMT1Q8N4J0 409 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SENP8Q96LD8 212 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TKTL2Q9H0I9 626 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 HPS4Q9NQG7 708 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 RHOAP61586 193 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 MRPS31Q92665 395 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 VPS28Q9UK41 221 aa19.11■□□□□ 0.65
CNTNAP3B-203ENST00000377561 IGKV6D-41A0A0C4DH26 115 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 IRF6O14896 467 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ALDH2P05091 517 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 USP17L7P0C7H9 530 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NR5A2O00482 541 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ALOX15P16050 662 aaPredicted RBP19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ZNF470Q6ECI4 717 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 APBA2Q99767 749 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ALDH1A2O94788 518 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 DRD4P21917 467 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NME5P56597 212 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ELF3P78545 371 aaPredicted RBP19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 BTKQ06187 659 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 RNF43Q68DV7 783 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ABHD15Q6UXT9 468 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TFAP2DQ7Z6R9 452 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 EXOC3L1Q86VI1 746 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 CATSPER2Q96P56 530 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PRR23D1E9PI22 279 aaPredicted RBP19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PRR23D2P0DMB1 279 aaPredicted RBP19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PSMC3P17980 439 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 SCNN1BP51168 640 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ADRM1Q16186 407 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ZCCHC23Q6ZST2 131 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 TRIM48Q8IWZ4 208 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 FAM9CQ8IZT9 166 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ZNF670Q9BS34 389 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NRDE2Q9H7Z3 1164 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NMRAL1Q9HBL8 299 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 XPNPEP3Q9NQH7 507 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ARMCX1Q9P291 453 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 CBX4O00257 560 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 JAM2P57087 298 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 DGKZQ13574 1117 aa19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 PSTKQ8IV42 348 aaKnown RBP19.1■□□□□ 0.65
CNTNAP3B-203ENST00000377561 CCNE2O96020 404 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 MLH1P40692 756 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 RIN3Q8TB24 985 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ST6GALNAC4Q9H4F1 302 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 NMRK2Q9NPI5 230 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 ZCCHC18P0CG32 403 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 MLNP12872 115 aa19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 FSCN1Q16658 493 aaKnown RBP19.09■□□□□ 0.65
CNTNAP3B-203ENST00000377561 KHDRBS2Q5VWX1 349 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms