RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
VRK3-202ENST00000377011 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
VRK3-202ENST00000377011 GEMIN8Q9NWZ8 242 aaKnown RBP12.84□□□□□ -0.35
VRK3-202ENST00000377011 IL37Q9NZH6 218 aa12.84□□□□□ -0.35
VRK3-202ENST00000377011 ATG2BQ96BY7 2078 aa12.83□□□□□ -0.35
VRK3-202ENST00000377011 RASGRF2O14827 1237 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 CHUKO15111 745 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 TCEA3O75764 348 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 RASSF9O75901 435 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 TBX18O95935 607 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 GAS8O95995 478 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 GSTA1P08263 222 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 ARSAP15289 507 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 CHN1P15882 459 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 TCF15Q12870 199 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 PPP1R7Q15435 360 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.36
VRK3-202ENST00000377011 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 AADACL2Q6P093 401 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 RHBDF2Q6PJF5 856 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 TPRG1Q6ZUI0 275 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 CCDC13Q8IYE1 715 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 CCDC197Q8NCU1 140 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 MAGEC3Q8TD91 643 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
VRK3-202ENST00000377011 PHOX2BQ99453 314 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 HPS4Q9NQG7 708 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 SMPD4Q9NXE4 827 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 DLGAP2Q9P1A6 1054 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 NUDT5Q9UKK9 219 aa12.83□□□□□ -0.36
VRK3-202ENST00000377011 PSTPIP1O43586 416 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 FAM200BP0CF97 657 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 TARSP26639 723 aaKnown RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 STARD6P59095 220 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 ZNF77Q15935 545 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 SGO2Q562F6 1265 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 ANKRD20A8PQ5CZ79 823 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 TMEM270Q6UE05 265 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 RELL1Q8IUW5 271 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 MCOLN2Q8IZK6 566 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 UBA3Q8TBC4 463 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 SNF8Q96H20 258 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 ZFRQ96KR1 1074 aaKnown RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 DDX23Q9BUQ8 820 aaKnown RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 LINC00597Q9H2U6 94 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 SEMA4AQ9H3S1 761 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 MFSD1Q9H3U5 465 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 MIA3Q5JRA6 1907 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 FAM92AA1XBS5 289 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 STK25O00506 426 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 MDM4O15151 490 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 ATMINO43313 823 aaPredicted RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 FGF19O95750 216 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 OLFM2O95897 454 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 OAS1P00973 400 aaKnown RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 CYP1A1P04798 512 aaPredicted RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 ZDHHC11BP0C7U3 371 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 HDCP19113 662 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 AOC1P19801 751 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 BRD2P25440 801 aaKnown RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 YWHAQP27348 245 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 WEE1P30291 646 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 AVPR1AP37288 418 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 GSCP56915 257 aaPredicted RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 QPCTQ16769 361 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 GOLGA7BQ2TAP0 167 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 PIGWQ7Z7B1 504 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 SCD5Q86SK9 330 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 BPIFB1Q8TDL5 484 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 FBXO32Q969P5 355 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 FAM83CQ9BQN1 747 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 DUSP16Q9BY84 665 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 EBF3Q9H4W6 596 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 INTS9Q9NV88 658 aaKnown RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 UXTQ9UBK9 157 aaPredicted RBP12.82□□□□□ -0.36
VRK3-202ENST00000377011 ANAPC7Q9UJX3 599 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 PCDHB4Q9Y5E5 795 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 WNT6Q9Y6F9 365 aa12.82□□□□□ -0.36
VRK3-202ENST00000377011 FAM170AA1A519 330 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 O00370 1275 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 PIK3R2O00459 728 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 NDC80O14777 642 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 COCHO43405 550 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 DNAJC8O75937 253 aaPredicted RBP12.81□□□□□ -0.36
VRK3-202ENST00000377011 CKMP06732 381 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 ZNF132P52740 706 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 PDE4CQ08493 712 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 AUHQ13825 339 aaKnown RBP12.81□□□□□ -0.36
VRK3-202ENST00000377011 ARHGAP17Q68EM7 881 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 BHLHA9Q7RTU4 235 aa12.81□□□□□ -0.36
VRK3-202ENST00000377011 PIGZQ86VD9 579 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms