RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CAPSQ13938 189 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 KRT81Q14533 505 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 RXFP2Q8WXD0 754 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 USP13Q92995 863 aaPredicted RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 TMIGD2Q96BF3 282 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 MRPL1Q9BYD6 325 aaKnown RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 DNAJC28Q9NX36 388 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 GNEQ9Y223 722 aaKnown RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 PCDHA11Q9Y5I1 949 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 STX16-NPEPL1H3BU86 382 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 SERPINE1P05121 402 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 NUDT2P50583 147 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 THOP1P52888 689 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 MS4A2Q01362 244 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 TMEM259Q4ZIN3 620 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 CES3Q6UWW8 571 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ATXN7L3BQ96GX2 97 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF512Q96ME7 567 aaPredicted RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 NLRP4Q96MN2 994 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 MOCS1Q9NZB8 636 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 NDUFA13Q9P0J0 144 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF510Q9Y2H8 683 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 SIP14410 1827 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 MICAL2O94851 1124 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 KRT19P08727 400 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 ARL2P36404 184 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 BCAR1P56945 870 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 ABCE1P61221 599 aaKnown RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 CASC4Q6P4E1 433 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 CMC1Q7Z7K0 106 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 HSPBAP1Q96EW2 488 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PKP2Q99959 881 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PDGFDQ9GZP0 370 aaPredicted RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 WDR55Q9H6Y2 383 aaPredicted RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 COMMD8Q9NX08 183 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 RIMS3Q9UJD0 308 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 ARHGAP26Q9UNA1 814 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 E2F6O75461 281 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 NAMPTP43490 491 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 CCR10P46092 362 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 ADARP55265 1226 aaKnown RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 HDAC4P56524 1084 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 GBE1Q04446 702 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 HACE1Q8IYU2 909 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PLD6Q8N2A8 252 aaKnown RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 RDM1Q8NG50 284 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 RTP4Q96DX8 246 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 MFHAS1Q9Y4C4 1052 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PTPRFP10586 1907 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 H0YCG3 227 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 M0QYV0 167 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 NEMP1O14524 444 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 RALBP11234 206 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PDGFRAP16234 1089 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 DPP6P42658 865 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 ABCG1P45844 678 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 CNTN2Q02246 1040 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 TIFABQ6ZNK6 161 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 FAM156AQ8NDB6 213 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 PRPF31Q8WWY3 499 aaKnown RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 MCRS1Q96EZ8 462 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 LHX5Q9H2C1 402 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 COPG2Q9UBF2 871 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 CEPT1Q9Y6K0 416 aa11.79□□□□□ -0.52
TM9SF2-201ENST00000376387 APOL1O14791 398 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 CFLARO15519 480 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 CSDE1O75534 798 aaKnown RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 HOXC6P09630 235 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 TFE3P19532 575 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 CCND2P30279 289 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF143P52747 638 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 FSTL1Q12841 308 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 BSPRYQ5W0U4 402 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 LRGUKQ96M69 825 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 ASNSD1Q9NWL6 643 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 SSX2IPQ9Y2D8 614 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 TDRKHQ9Y2W6 561 aaKnown RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 TRIP11Q15643 1979 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 ALOX15P16050 662 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 GPD1P21695 349 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 GTF2A2P52657 109 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 PGGT1BP53609 377 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 SESN2P58004 480 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 APOFQ13790 326 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 TFDP2Q14188 446 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 ADGRE1Q14246 886 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms