RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RBM15Q96T37 977 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDPN-202ENST00000376057 CDC42EP4Q9H3Q1 356 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 SEMA4AQ9H3S1 761 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 TMEM248Q9NWD8 314 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 INSL5Q9Y5Q6 135 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 OBSL1O75147 1896 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 HMGB1P1B2RPK0 211 aaPredicted RBP11.44□□□□□ -0.58
PDPN-202ENST00000376057 E9PAM4 449 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 TEX28O15482 410 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 CACNG3O60359 315 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 TLR5O60602 858 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 SOAT2O75908 522 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 PAPLNO95428 1278 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 OAS1P00973 400 aaKnown RBP11.44□□□□□ -0.58
PDPN-202ENST00000376057 GSTA2P09210 222 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 EPHB2P29323 1055 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 OAS2P29728 719 aaKnown RBP11.44□□□□□ -0.58
PDPN-202ENST00000376057 GARSP41250 739 aaKnown RBP11.44□□□□□ -0.58
PDPN-202ENST00000376057 MAGEA3P43357 314 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 PARP6Q2NL67 630 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 TNFAIP8L3Q5GJ75 292 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 HECTD3Q5T447 861 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 PGM2Q96G03 612 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 CYP4F11Q9HBI6 524 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 TRPM5Q9NZQ8 1165 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 OLFM2O95897 454 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 VAV1P15498 845 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 ELF1P32519 619 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 MAGEA4P43358 317 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 IFNAR2P48551 515 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 MS4A13Q5J8X5 152 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 C10orf120Q5SQS8 335 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 PIK3R6Q5UE93 754 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 ZSCAN18Q8TBC5 510 aaPredicted RBP11.44□□□□□ -0.58
PDPN-202ENST00000376057 GIPC2Q8TF65 315 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 P2RY11Q96G91 374 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 EMILIN2Q9BXX0 1053 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 PRDM12Q9H4Q4 367 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 DOCK4Q8N1I0 1966 aa11.44□□□□□ -0.58
PDPN-202ENST00000376057 ERI2A8K979 691 aaKnown RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 ZBBXA8MT70 800 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 MSI1O43347 362 aaKnown RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 FGF19O95750 216 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ADH1AP07327 375 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ATP2A2P16615 1042 aaKnown RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 CDR1P51861 262 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 IFI35P80217 286 aaPredicted RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 WASHC5Q12768 1159 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 EFEMP1Q12805 493 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 IFRD2Q12894 506 aaPredicted RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 HIF1AQ16665 826 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ANKRD20A2Q5SQ80 823 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ANKRD20A1Q5TYW2 823 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ANKRD20A3Q5VUR7 823 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 FAM117BQ6P1L5 589 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 LRRC31Q6UY01 552 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 PRUNE1Q86TP1 453 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 KLHL5Q96PQ7 755 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 NINJ2Q9NZG7 142 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 CXXC1Q9P0U4 656 aaPredicted RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 MFHAS1Q9Y4C4 1052 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ANAPC1Q9H1A4 1944 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 DENND4CQ5VZ89 1909 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 SPAG6O75602 509 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 F11P03951 625 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 MYZAPP0CAP1 466 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 MAPKAPK2P49137 400 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 SLC29A2Q14542 456 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 STAT4Q14765 748 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 TIGD7Q6NT04 549 aaPredicted RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 ARHGAP12Q8IWW6 846 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 CCDC13Q8IYE1 715 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 C7orf61Q8IZ16 206 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 NPWQ8N729 165 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 GPR152Q8TDT2 470 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ZYG11BQ9C0D3 744 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 ZNF212Q9UDV6 495 aa11.43□□□□□ -0.58
PDPN-202ENST00000376057 XPO7Q9UIA9 1087 aaKnown RBP11.43□□□□□ -0.58
PDPN-202ENST00000376057 GOLGA6L10A6NI86 522 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 A6NNZ2 444 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 PSMD3O43242 534 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 SUN1O94901 812 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 CNPP09543 421 aaKnown RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 VPS41P49754 854 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 TUBB8Q3ZCM7 444 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 CYS1Q717R9 158 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 DNAJB7Q7Z6W7 309 aaPredicted RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 TDRPQ86YL5 185 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 RIBC1Q8N443 379 aaPredicted RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 MRPL43Q8N983 215 aaKnown RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 SERPINB12Q96P63 405 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 C10orf88Q9H8K7 445 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 XAB2Q9HCS7 855 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms