RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPATA24Q86W54 205 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 CDKL3Q8IVW4 592 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 FBXW8Q8N3Y1 598 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 CMTM5Q96DZ9 223 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 ATXN7L3BQ96GX2 97 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 MIS12Q9H081 205 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 MORF4L1Q9UBU8 362 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 SLC4A7Q9Y6M7 1214 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 ACKR2O00590 384 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 RALBP11234 206 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 TPSB2P20231 275 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 MGAT1P26572 445 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 HDAC4P56524 1084 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 ABCE1P61221 599 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 CCNA1P78396 465 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 TLR1Q15399 786 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 TPSAB1Q15661 275 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 CMC1Q7Z7K0 106 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 SHCBP1Q8NEM2 672 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 CXorf38Q8TB03 319 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 HPDLQ96IR7 371 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 SIKE1Q9BRV8 207 aa14.49□□□□□ -0.09
CLCNKA-202ENST00000375692 ZBTB42B2RXF5 422 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ITGA2BP08514 1039 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 STAG3L1P0CL83 205 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ERVK-10P10266 1014 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 COX4I1P13073 169 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 VAV1P15498 845 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 SDC4P31431 198 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 CHN2P52757 468 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 GOLGA7BQ2TAP0 167 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ANKRD20A4Q4UJ75 823 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 SLC9B1Q4ZJI4 515 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 FAM160B1Q5W0V3 765 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 KBTBD6Q86V97 674 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 DRAXINQ8NBI3 349 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ICA1LQ8NDH6 482 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 PPP1R36Q96LQ0 422 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 COG4Q9H9E3 785 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 DNAJC28Q9NX36 388 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 COPG2Q9UBF2 871 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 DCDC2Q9UHG0 476 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 G3BP2Q9UN86 482 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 TLL2Q9Y6L7 1015 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 GABBR2O75899 941 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 PYGLP06737 847 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 NIPAL4Q0D2K0 466 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 MXD4Q14582 209 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ZNF792Q3KQV3 632 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 STXBP5Q5T5C0 1151 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 OLFML1Q6UWY5 402 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 TMC7Q7Z402 723 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 IFNL1Q8IU54 200 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 NME8Q8N427 588 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ZNF781Q8N8C0 355 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 MAPK15Q8TD08 544 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 JADE3Q92613 823 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 ATP2A3Q93084 1043 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 LGMNQ99538 433 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 LPIN3Q9BQK8 851 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 FZD8Q9H461 694 aa14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 STN1Q9H668 368 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-202ENST00000375692 DOCK3Q8IZD9 2030 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 TRPM7Q96QT4 1865 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 TRIP11Q15643 1979 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 C15orf38-AP3S2A0A0A6YYH1 394 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ALDH1A2O94788 518 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 SLC10A3P09131 477 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 PIM1P11309 404 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 CNTFP26441 200 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 TYK2P29597 1187 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 MLH1P40692 756 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 RANBP1P43487 201 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ABCG1P45844 678 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ALDH1A3P47895 512 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 CLCN3P51790 818 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 OLIG2Q13516 323 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 SEMA5AQ13591 1074 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 FAM110CQ1W6H9 321 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 HSDL1Q3SXM5 330 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 PPP1R26Q5T8A7 1209 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 HEATR6Q6AI08 1181 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 LCLAT1Q6UWP7 414 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 NAPRTQ6XQN6 538 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ARMCX2Q7L311 632 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ARPINQ7Z6K5 226 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 PLD6Q8N2A8 252 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ARNTL2Q8WYA1 636 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 SEPT1Q8WYJ6 367 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ZNF670Q9BS34 389 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 MAF1Q9H063 256 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 FAM49BQ9NUQ9 324 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 UBAP1Q9NZ09 502 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 DTNAQ9Y4J8 743 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 ANK1P16157 1881 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 GOLGA8QA0A0J9YX86 632 aa14.47□□□□□ -0.09
CLCNKA-202ENST00000375692 GOLGA8OA6NCC3 632 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms