RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 SIRPGQ9P1W8 387 aa14.08□□□□□ -0.15
MCF2L-204ENST00000375608 FNDC3AQ9Y2H6 1198 aaKnown RBP14.08□□□□□ -0.15
MCF2L-204ENST00000375608 SH3BP1Q9Y3L3 701 aa14.08□□□□□ -0.15
MCF2L-204ENST00000375608 COMMD10Q9Y6G5 202 aa14.08□□□□□ -0.15
MCF2L-204ENST00000375608 ATP6AP2A0A1C7CYW4 349 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ATP6AP2O75787 350 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 EDN1P05305 212 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 DHRS4L1P0CG22 281 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ME2P23368 584 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 CCR3P51677 355 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ATP1A4Q13733 1029 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 STILQ15468 1287 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 C15orf39Q6ZRI6 1047 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 DSELQ8IZU8 1212 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 PAF1Q8N7H5 531 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.08□□□□□ -0.16
MCF2L-204ENST00000375608 HTR3CQ8WXA8 447 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 HAUS8Q9BT25 410 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 PCDHAC1Q9H158 963 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 EFCAB1Q9HAE3 211 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 CHST12Q9NRB3 414 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 SNX15Q9NRS6 342 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 COPG2Q9UBF2 871 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 PSMD13Q9UNM6 376 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 CDYLQ9Y232 598 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 SCN7AQ01118 1682 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 PAPPAQ13219 1627 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 C10orf71Q711Q0 1435 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ZBBXA8MT70 800 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 CAPN14A8MX76 684 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 GRIA2P42262 883 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 EFCAB12Q6NXP0 572 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ZBTB49Q6ZSB9 765 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 TSPAN14Q8NG11 270 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 MZB1Q8WU39 189 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 PDCD6IPQ8WUM4 868 aaKnown RBP14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ATP6V1E2Q96A05 226 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 AGAP2Q99490 1192 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 EFHD1Q9BUP0 239 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 FRMD8P1Q9BZ68 369 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-204ENST00000375608 GCOM2Q9BZD3 368 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-204ENST00000375608 SIK2Q9H0K1 926 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 ARHGEF38Q9NXL2 777 aa14.08□□□□□ -0.16
MCF2L-204ENST00000375608 C9JVG2 144 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 STAG3L1P0CL83 205 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 KCNA2P16389 499 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 SP2Q02086 613 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 LSAMPQ13449 338 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 AGKQ53H12 422 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 PITRM1Q5JRX3 1037 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 RWDD4Q6NW29 188 aaKnown RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 ARCQ7LC44 396 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 ZNF513Q8N8E2 541 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 TEX13BQ9BXU2 312 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 MRPL46Q9H2W6 279 aaKnown RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 E7ESA3 106 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 TK2O00142 265 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 ASLP04424 464 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 IRF9Q00978 393 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 ITKQ08881 620 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 CES4AQ5XG92 561 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 FBXL19Q6PCT2 694 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 CMASQ8NFW8 434 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 SDCBP2Q9H190 292 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 WARS2Q9UGM6 360 aaKnown RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 CRCPO75575 148 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 HNRNPLP14866 589 aaKnown RBP eCLIP14.07□□□□□ -0.163e-7■■■■□ 24.9
MCF2L-204ENST00000375608 GP5P40197 560 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 SULT1E1P49888 294 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 TMEM132DQ14C87 1099 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 TBC1D25Q3MII6 688 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 MTX3Q5HYI7 312 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 GRAMD4Q6IC98 578 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 TTC33Q6PID6 262 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-204ENST00000375608 GADL1Q6ZQY3 521 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 APBA2Q99767 749 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 NMRAL1Q9HBL8 299 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 PCDHGB4Q9UN71 923 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 PCDHGB5Q9Y5G0 923 aa14.07□□□□□ -0.16
MCF2L-204ENST00000375608 DLEC1Q9Y238 1755 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 ZBTB14O43829 449 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
MCF2L-204ENST00000375608 ABCD1P33897 745 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 PSMD7P51665 324 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 MSLNQ13421 630 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-204ENST00000375608 NBPF12Q5TAG4 269 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-204ENST00000375608 ABHD15Q6UXT9 468 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
MCF2L-204ENST00000375608 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 ZFP28Q8NHY6 868 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 CLEC4CQ8WTT0 213 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 PHF21BQ96EK2 531 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 LRRC4Q9HBW1 653 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 RGL2O15211 777 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 BIRC5O15392 142 aa14.06□□□□□ -0.16
MCF2L-204ENST00000375608 TFPTP0C1Z6 253 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms