RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 MYH13Q9UKX3 1938 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 DDX3YO15523 660 aaKnown RBP18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 VPS26AO75436 327 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 MYO1DO94832 1006 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 NDUFV1P49821 464 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 GBE1Q04446 702 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 OTOP2Q7RTS6 562 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 KCNK16Q96T55 309 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 TBC1D13Q9NVG8 400 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 PCDHGB4Q9UN71 923 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 DRG1Q9Y295 367 aaKnown RBP18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 CRYL1Q9Y2S2 319 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 ORC6Q9Y5N6 252 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 ZMYM2Q9UBW7 1377 aa18.38■□□□□ 0.53
PTPDC1-202ENST00000375360 CD48P09326 243 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 ADRA1DP25100 572 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 PSMD5Q16401 504 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 SLC39A4Q6P5W5 647 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 SNX31Q8N9S9 440 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 CCDC138Q96M89 665 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 HMGXB4Q9UGU5 601 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 HAO1Q9UJM8 370 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 CDYLQ9Y232 598 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 PTCH2Q9Y6C5 1203 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 IGF2BP3O00425 579 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 PHGDHO43175 533 aaKnown RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 MMP13P45452 471 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 TBCCQ15814 346 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 PPM1LQ5SGD2 360 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 ANKS3Q6ZW76 656 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 N4BP2L2Q92802 583 aaPredicted RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 MAGEB18Q96M61 343 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 CORO1BQ9BR76 489 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 RNF112Q9ULX5 631 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 A0A096LPK6 155 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 ARL5CA6NH57 179 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 LUC7L3O95232 432 aaKnown RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 INHAP05111 366 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 NME5P56597 212 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 BTKQ06187 659 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 USP41Q3LFD5 358 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 TTMPQ5BVD1 217 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 LRRC57Q8N9N7 239 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 MIPOL1Q8TD10 442 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 USP13Q92995 863 aaPredicted RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 TUBGCP3Q96CW5 907 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 SLC13A4Q9UKG4 626 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 LCA5LO95447 670 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 CFHP08603 1231 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 ATP4AP20648 1035 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 PBX3P40426 434 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 TARBP2Q15633 366 aaKnown RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 PARP6Q2NL67 630 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 TMEM63BQ5T3F8 832 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 SRPK1Q96SB4 655 aaKnown RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 MRPL1Q9BYD6 325 aaKnown RBP18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 WWOXQ9NZC7 414 aa18.37■□□□□ 0.53
PTPDC1-202ENST00000375360 SOAT2O75908 522 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 TAF10Q12962 218 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 UROC1Q96N76 676 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 NDE1Q9NXR1 346 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 UBA2Q9UBT2 640 aaPredicted RBP18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 SLC25A13Q9UJS0 675 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 HACD1B0YJ81 288 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 RGS20O76081 388 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 ADRA1BP35368 520 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 CD151P48509 253 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 STXBP5LQ9Y2K9 1186 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 DERAQ9Y315 318 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 ADCY6O43306 1168 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 CCNB1P14635 433 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 ITGALP20701 1170 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 SMAD3P84022 425 aaKnown RBP18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 MTDHQ86UE4 582 aaKnown RBP18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 CFAP52Q8N1V2 620 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 PLK2Q9NYY3 685 aa18.36■□□□□ 0.53
PTPDC1-202ENST00000375360 PBLDP30039 288 aaPredicted RBP18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 PPP3CCP48454 512 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 AP2B1P63010 937 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 MAPRE2Q15555 327 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 SCLYQ96I15 445 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 ZNF670Q9BS34 389 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 TMCC1O94876 653 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 KLHL2O95198 593 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 SELPP16109 830 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 GCKP35557 465 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 CD86P42081 329 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 SERPINB4P48594 390 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 AARSP49588 968 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 SLC25A52Q3SY17 297 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 PSTKQ8IV42 348 aaKnown RBP18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 PCED1BQ96HM7 432 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 E9PBE3 544 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 KLHL41O60662 606 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 LRRC8DQ7L1W4 858 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 KLHL5Q96PQ7 755 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms