RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CHN2P52757 468 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 DDX39BQ13838 428 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 NRF1Q16656 503 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ULK2Q8IYT8 1036 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 OSCP1Q8WVF1 389 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 DDX43Q9NXZ2 648 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CLIC5Q9NZA1 410 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ANKRD6Q9Y2G4 727 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 TRUB2O95900 331 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SERPINA6P08185 405 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 MMP8P22894 467 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CCL15Q16663 113 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 UNC5AQ6ZN44 842 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 BHLHE22Q8NFJ8 381 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 MFSD14AQ96MC6 490 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 BBS2Q9BXC9 721 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 NMRK1Q9NWW6 199 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ZNF839A8K0R7 811 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 A8MUI8 341 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 PSMB4P28070 264 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 RENBPP51606 427 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 UBE3AQ05086 875 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ARHGEF7Q14155 803 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SLC1A5Q15758 541 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 PKN3Q6P5Z2 889 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ZNF572Q7Z3I7 529 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 ALYREFQ86V81 257 aaKnown RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 CENPLQ8N0S6 344 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-203ENST00000375274 DHRSXQ8N5I4 330 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 OR52K1Q8NGK4 314 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 SEMA6AQ9H2E6 1030 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 RNPEPQ9H4A4 650 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 COPG2Q9UBF2 871 aa11.78□□□□□ -0.52
PTCH1-203ENST00000375274 GSC2O15499 205 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 KRT75O95678 551 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 CRTAMO95727 393 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.52
PTCH1-203ENST00000375274 COX4I1P13073 169 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 PPP3CCP48454 512 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 JAM2P57087 298 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.52
PTCH1-203ENST00000375274 CYP51A1Q16850 503 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 ASTE1Q2TB18 679 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-203ENST00000375274 ANKS6Q68DC2 871 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 PRMT9Q6P2P2 845 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 SLC27A1Q6PCB7 646 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 MECRQ9BV79 373 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 MID1IP1Q9NPA3 183 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.52
PTCH1-203ENST00000375274 TIMM13Q9Y5L4 95 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-203ENST00000375274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 C1orf232A0A0U1RR37 186 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 RGS5O15539 181 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 SLC11A2P49281 568 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 CPT1AP50416 773 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 CCDC15Q0P6D6 951 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 WASHC5Q12768 1159 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 PDK3Q15120 406 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 NEDD8Q15843 81 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 FAM98BQ52LJ0 330 aaKnown RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 POLG2Q9UHN1 485 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 PSMD12O00232 456 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 HDAC3O15379 428 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 IRF1P10914 325 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 AKAP5P24588 427 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 UBAP2LQ14157 1087 aaKnown RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 FRG1Q14331 258 aaKnown RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 SCARA3Q6AZY7 606 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 B3GNT6Q6ZMB0 384 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 STK32CQ86UX6 486 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 TRIM69Q86WT6 500 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 PSTKQ8IV42 348 aaKnown RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 CCDC103Q8IW40 242 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 FAM9CQ8IZT9 166 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 FBXO32Q969P5 355 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 NR1H4Q96RI1 486 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 NMUR2Q9GZQ4 415 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 IL22Q9GZX6 179 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 KLHL25Q9H0H3 589 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 EPS8L2Q9H6S3 715 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 MAN1C1Q9NR34 630 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 SPASTQ9UBP0 616 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 ANKRD26Q9UPS8 1709 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 SMIM31A0A1B0GVY4 71 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 IQCA1LA6NCM1 817 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 F5H5T6 163 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms