RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 MAGEB16A2A368 324 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 ARVCFO00192 962 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 GABRDO14764 452 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SPTLC1O15269 473 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 CREB3O43889 395 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 MFSD11O43934 449 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 RFPL1O75677 317 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 LUC7L3O95232 432 aaKnown RBP12.56□□□□□ -0.4
UBR4-203ENST00000375225 CHRNA1P02708 482 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 C1QAP02745 245 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 THP07101 528 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 CYP2C18P33260 490 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 TKTL1P51854 596 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 STX3Q13277 289 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 MDH1BQ5I0G3 518 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SYCP2LQ5T4T6 812 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 ZNF534Q76KX8 674 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 BNIPLQ7Z465 357 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 METTL23Q86XA0 190 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SLC43A3Q8NBI5 491 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 STKLD1Q8NE28 680 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 ARMC2Q8NEN0 867 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
UBR4-203ENST00000375225 P2RY11Q96G91 374 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 OXNAD1Q96HP4 312 aaPredicted RBP12.56□□□□□ -0.4
UBR4-203ENST00000375225 PPP1R10Q96QC0 940 aaKnown RBP12.56□□□□□ -0.4
UBR4-203ENST00000375225 CPNE1Q99829 537 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SYT15Q9BQS2 421 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 BTBD10Q9BSF8 475 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 TBC1D10AQ9BXI6 508 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SLC13A1Q9BZW2 595 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 LRRC40Q9H9A6 602 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 BATF3Q9NR55 127 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 PCMTD2Q9NV79 361 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 THAP1Q9NVV9 213 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
UBR4-203ENST00000375225 SEPT10Q9P0V9 454 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 C15orf41Q9Y2V0 281 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 GIT1Q9Y2X7 761 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 SQORQ9Y6N5 450 aa12.56□□□□□ -0.4
UBR4-203ENST00000375225 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CXorf49A8MYA2 514 aaPredicted RBP12.55□□□□□ -0.4
UBR4-203ENST00000375225 GYG2O15488 501 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 AP1G2O75843 785 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 MAP3K6O95382 1288 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 ANP32DO95626 131 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 BPGMP07738 259 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 DLDP09622 509 aaKnown RBP12.55□□□□□ -0.4
UBR4-203ENST00000375225 CSH1P0DML2 217 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CSH2P0DML3 217 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 SRGAP2BP0DMP2 458 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CCL5P13501 91 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 VAV1P15498 845 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 TFE3P19532 575 aaPredicted RBP12.55□□□□□ -0.4
UBR4-203ENST00000375225 GRK2P25098 689 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 HTR7P34969 479 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 GP5P40197 560 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 HADHAP40939 763 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CDK7P50613 346 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CCNG1P51959 295 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 PDE1BQ01064 536 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 ZNF33AQ06730 810 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 NIPAL4Q0D2K0 466 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 WASHC5Q12768 1159 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 OVGP1Q12889 678 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 NME3Q13232 169 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 DPYSQ14117 519 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CHI3L2Q15782 390 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 FAM26DQ5JW98 314 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 MROH9Q5TGP6 573 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 CLEC20AQ6ZU45 233 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 PID1Q7Z2X4 250 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 RASSF3Q86WH2 238 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 SMG8Q8ND04 991 aaKnown RBP12.55□□□□□ -0.4
UBR4-203ENST00000375225 SLC7A14Q8TBB6 771 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 PGBD4Q96DM1 585 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 SMARCD1Q96GM5 515 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 SENP8Q96LD8 212 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 RNF208Q9H0X6 261 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
UBR4-203ENST00000375225 RNPEPL1Q9HAU8 725 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 ALG13Q9NP73 1137 aaKnown RBP12.55□□□□□ -0.4
UBR4-203ENST00000375225 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 ZFATQ9P243 1243 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 DSEQ9UL01 958 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
UBR4-203ENST00000375225 DCLK1O15075 740 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 H2AFYO75367 372 aaKnown RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 MYL2P10916 166 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 ODC1P11926 461 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 SPRP35270 261 aaPredicted RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 ADRA1BP35368 520 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms