RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SPANXN3Q5MJ09 141 aa8.55□□□□□ -1.04
HSPG2-203ENST00000374695 SLC44A2Q8IWA5 706 aaPredicted RBP8.55□□□□□ -1.04
HSPG2-203ENST00000374695 SAMD3Q8N6K7 520 aa8.55□□□□□ -1.04
HSPG2-203ENST00000374695 RP9Q8TA86 221 aaKnown RBP8.55□□□□□ -1.04
HSPG2-203ENST00000374695 BSNDQ8WZ55 320 aa8.55□□□□□ -1.04
HSPG2-203ENST00000374695 APOPT1Q96IL0 206 aa8.55□□□□□ -1.04
HSPG2-203ENST00000374695 DCP1AQ9NPI6 582 aaPredicted RBP8.55□□□□□ -1.04
HSPG2-203ENST00000374695 SAE1Q9UBE0 346 aaPredicted RBP8.55□□□□□ -1.04
HSPG2-203ENST00000374695 MGAT4AQ9UM21 535 aa8.55□□□□□ -1.04
HSPG2-203ENST00000374695 UNC13BO14795 1591 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 RGS14O43566 566 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SMNDC1O75940 238 aaKnown RBP eCLIP8.54□□□□□ -1.041e-10■■■■□ 24.3
HSPG2-203ENST00000374695 SEC24AO95486 1093 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ASS1P00966 412 aaKnown RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 HLA-DRAP01903 254 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SLFN11Q7Z7L1 901 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 LBHD1Q9BQE6 289 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PCDH9Q9HC56 1237 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SPEF2Q9C093 1822 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 KBTBD13C9JR72 458 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 MAP2K7O14733 419 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 LRPAP1P30533 357 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 FXR2P51116 673 aaKnown RBP eCLIP8.54□□□□□ -1.041e-6■■■□□ 15.2
HSPG2-203ENST00000374695 MYL6P60660 151 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 MGAT5Q09328 741 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 RFX4Q33E94 735 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 GALNT18Q6P9A2 607 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ABRAXAS1Q6UWZ7 409 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PALB2Q86YC2 1186 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 MAP3K14Q99558 947 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 RAVER2Q9HCJ3 691 aaKnown RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF304Q9HCX3 659 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 CHST12Q9NRB3 414 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 CRYL1Q9Y2S2 319 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 NCF1BA6NI72 391 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 NCF1CA8MVU1 366 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 TNFRSF21O75509 655 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 NCF1P14598 390 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 TRAP1Q12931 704 aaKnown RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ACTR8Q9H981 624 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PRDM16Q9HAZ2 1276 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PRELID1Q9Y255 219 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ITGA2P17301 1181 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 EPHB2P29323 1055 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ACOT2P49753 483 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ITGB3BPQ13352 177 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 C11orf63Q6NUN7 778 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 UBE2Q1Q7Z7E8 422 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 AKAP14Q86UN6 197 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF614Q8N883 585 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ANKEF1Q9NU02 776 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 MAGI2Q86UL8 1455 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 LOC100506127A0A0U1RQW1 187 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 F5H6K3 240 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 MDM4O15151 490 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PGAM1P18669 254 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 MYL9P24844 172 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 COPZ1P61923 177 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 KLRC3Q07444 240 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 GLB1LQ6UWU2 654 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 BTN2A1Q7KYR7 527 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 FBXO36Q8NEA4 188 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 COX4I2Q96KJ9 171 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 CELF4Q9BZC1 486 aaKnown RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 TDP2O95551 362 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 STRIP1Q5VSL9 837 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 AGMOQ6ZNB7 445 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SLC25A23Q9BV35 468 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 GPN1Q9HCN4 374 aaPredicted RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 E2F8A0AVK6 867 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ADRA2BP18089 450 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PKN1Q16512 942 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 TNFAIP8L3Q5GJ75 292 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 C1QTNF7Q9BXJ2 289 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 TNPO3Q9Y5L0 923 aaKnown RBP8.54□□□□□ -1.04
HSPG2-203ENST00000374695 STX16-NPEPL1H3BU86 382 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 STX16O14662 325 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 OPLAHO14841 1288 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 KCNQ3O43525 872 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 GRAP2O75791 330 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SEC24CP53992 1094 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 NME5P56597 212 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PYDC2Q56P42 97 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 KLHDC7AQ5VTJ3 777 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 GATAD2AQ86YP4 633 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 STK40Q8N2I9 435 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 B3GALT6Q96L58 329 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 CCNB1IP1Q9NPC3 277 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 ANAPC2Q9UJX6 822 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 NPTXRO95502 500 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 RFX3P48380 749 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 SLC15A2Q16348 729 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 CAPSLQ8WWF8 208 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 PNPLA3Q9NST1 481 aa8.54□□□□□ -1.04
HSPG2-203ENST00000374695 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms