RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CRTAC1Q9NQ79 661 aa17.52■□□□□ 0.4
RXRB-201ENST00000374680 BPTFQ12830 3046 aa17.52■□□□□ 0.39
RXRB-201ENST00000374680 ZNF638Q14966 1978 aaKnown RBP17.52■□□□□ 0.39
RXRB-201ENST00000374680 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 STK10O94804 968 aaKnown RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 ITGA9Q13797 1035 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 GRB14Q14449 540 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 SV2CQ496J9 727 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 RWDD4Q6NW29 188 aaKnown RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 PLD6Q8N2A8 252 aaKnown RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 RBM15BQ8NDT2 890 aaKnown RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 ACVR1CQ8NER5 493 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 SAR1AQ9NR31 198 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 MOCS1Q9NZB8 636 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 PACSIN3Q9UKS6 424 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 USP3Q9Y6I4 520 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 XPO1O14980 1071 aaKnown RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 FYNP06241 537 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 ITGA2BP08514 1039 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 MAGEA3P43357 314 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 ACADSBP45954 432 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 BZW1Q7L1Q6 419 aaKnown RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 NPWQ8N729 165 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 HSFY1Q96LI6 401 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 ZNF778Q96MU6 729 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 CYP4F11Q9HBI6 524 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 TTC3P53804 2025 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 JCHAINP01591 159 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 FAM200BP0CF97 657 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 NCF2P19878 526 aaPredicted RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 TPSB2P20231 275 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 TPI1P60174 286 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 OCRLQ01968 901 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 USP4Q13107 963 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 TPSAB1Q15661 275 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 C3orf58Q8NDZ4 430 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 CDKL2Q92772 493 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 PCED1BQ96HM7 432 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 TSPYL2Q9H2G4 693 aaPredicted RBP17.51■□□□□ 0.39
RXRB-201ENST00000374680 CHRAC1Q9NRG0 131 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 ZNF180Q9UJW8 692 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 EMCNQ9ULC0 261 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 INPP5FQ9Y2H2 1132 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 WASF2Q9Y6W5 498 aa17.51■□□□□ 0.39
RXRB-201ENST00000374680 SORBS2O94875 1100 aaKnown RBP17.5■□□□□ 0.39
RXRB-201ENST00000374680 BAG2O95816 211 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 F2P00734 622 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 POMCP01189 267 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 NOS2P35228 1153 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 SLC25A3Q00325 362 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 IRF9Q00978 393 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 STRADAQ7RTN6 431 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 SPATA6LQ8N4H0 392 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 WNT8BQ93098 351 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 NAF1Q96HR8 494 aaKnown RBP17.5■□□□□ 0.39
RXRB-201ENST00000374680 OLFM3Q96PB7 478 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 ATXN3LQ9H3M9 355 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 SMIM35A0A1B0GVV1 85 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 DNAJC6O75061 913 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 CELF2O95319 508 aaKnown RBP17.5■□□□□ 0.39
RXRB-201ENST00000374680 CRHR1P34998 444 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 ADRA1BP35368 520 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 AVPR1AP37288 418 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 SCNN1GP51170 649 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 MUM1Q2TAK8 710 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 OTOP3Q7RTS5 596 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 STRA8Q7Z7C7 330 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 SMOQ99835 787 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 SIRPGQ9P1W8 387 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 STAP1Q9ULZ2 295 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 DERAQ9Y315 318 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 HBS1LQ9Y450 684 aaKnown RBP17.5■□□□□ 0.39
RXRB-201ENST00000374680 LOC285556D6RIA3 1793 aa17.5■□□□□ 0.39
RXRB-201ENST00000374680 MYADML2A6NDP7 307 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 ARHGAP42A6NI28 874 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 PAX7P23759 505 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 ARRB2P32121 409 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 GLRBP48167 497 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 SLC1A6P48664 564 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 PDK1Q15118 436 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 CFAP61Q8NHU2 1237 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 ZNF398Q8TD17 642 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 CCDC124Q96CT7 223 aaKnown RBP17.49■□□□□ 0.39
RXRB-201ENST00000374680 LRRC39Q96DD0 335 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 NPY6RQ99463 290 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 TTC1Q99614 292 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 FRMD8Q9BZ67 464 aaPredicted RBP17.49■□□□□ 0.39
RXRB-201ENST00000374680 GNAZP19086 355 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 CCR10P46092 362 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 EPHB1P54762 984 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 TEX44Q53QW1 395 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 CXCL17Q6UXB2 119 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 ZC3H15Q8WU90 426 aaKnown RBP17.49■□□□□ 0.39
RXRB-201ENST00000374680 STMN2Q93045 179 aa17.49■□□□□ 0.39
RXRB-201ENST00000374680 HNRNPABQ99729 332 aaKnown RBP17.49■□□□□ 0.39
RXRB-201ENST00000374680 F8W810 466 aa17.48■□□□□ 0.39
RXRB-201ENST00000374680 BDNFP23560 247 aa17.48■□□□□ 0.39
RXRB-201ENST00000374680 ABL2P42684 1182 aa17.48■□□□□ 0.39
RXRB-201ENST00000374680 BRCC3P46736 316 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms