RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 USH1CQ9Y6N9 552 aa12.45□□□□□ -0.42
HMGCL-202ENST00000374487 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 YJEFN3A6XGL0 299 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 CXorf49A8MYA2 514 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-202ENST00000374487 TRIM49D1C9J1S8 452 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 E7ENQ6 273 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 NRP1O14786 923 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 PPP1R12AO14974 1030 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-202ENST00000374487 VAV1P15498 845 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 PRKCHP24723 683 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 DNAJB2P25686 324 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 PCSK1P29120 753 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 RPL9P32969 192 aaKnown RBP12.44□□□□□ -0.42
HMGCL-202ENST00000374487 MAGEA3P43357 314 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 CDK16Q00536 496 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 MGAT5Q09328 741 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 BNIP1Q12981 228 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 OTUD1Q5VV17 481 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-202ENST00000374487 RFX8Q6ZV50 586 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 TBC1D1Q86TI0 1168 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-202ENST00000374487 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 GSDMBQ8TAX9 411 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 P2RY11Q96G91 374 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 SIGLEC10Q96LC7 697 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 MANSC1Q9H8J5 431 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 CDH9Q9ULB4 789 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 COL6A3P12111 3177 aa12.44□□□□□ -0.42
HMGCL-202ENST00000374487 RNF103O00237 685 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 COPEO14579 308 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ENPP3O14638 875 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 OPHN1O60890 802 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 KRT38O76015 456 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 USP17L7P0C7H9 530 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ALADP13716 330 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ADRA1BP35368 520 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 GRIA1P42261 906 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 GATMP50440 423 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 MNAT1P51948 309 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 DAOAP59103 153 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ZNF534Q76KX8 674 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 HERC6Q8IVU3 1022 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 MPP5Q8N3R9 675 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 C3orf58Q8NDZ4 430 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 FAM111AQ96PZ2 611 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 LRRC37BQ96QE4 947 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 SMOQ99835 787 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ALG13Q9NP73 1137 aaKnown RBP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PDCD11Q14690 1871 aaKnown RBP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ABHD14A-ACY1A0A1B0GW23 586 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 DCTN3O75935 186 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 B3GAT3O94766 335 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 TROVE2P10155 538 aaKnown RBP eCLIP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 AIF1P55008 147 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 SLC18A2Q05940 514 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 CCDC15Q0P6D6 951 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 ARL13BQ3SXY8 428 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 AGMOQ6ZNB7 445 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 BNIPLQ7Z465 357 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
HMGCL-202ENST00000374487 DEPDC1BQ8WUY9 529 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 TTC17Q96AE7 1141 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 KLHL29Q96CT2 875 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 STAMBPL1Q96FJ0 436 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 SMARCD1Q96GM5 515 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PAAF1Q9BRP4 392 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PRDM12Q9H4Q4 367 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 DDIT4Q9NX09 232 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 PCDHA11Q9Y5I1 949 aa12.43□□□□□ -0.42
HMGCL-202ENST00000374487 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 POMCP01189 267 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 C1QAP02745 245 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 LTFP02788 710 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 FYNP06241 537 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 CA3P07451 260 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 ODC1P11926 461 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 GLUD2P49448 558 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 NCALDP61601 193 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PRKD1Q15139 912 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 UPP1Q16831 310 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 TIGD5Q53EQ6 642 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 BSPRYQ5W0U4 402 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 GPRIN1Q7Z2K8 1008 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 DEFB123Q8N688 67 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 APBB2Q92870 758 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 MTBPQ96DY7 904 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 TRIM56Q9BRZ2 755 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 CEP41Q9BYV8 373 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PLAC1Q9HBJ0 212 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SF3B1O75533 1304 aaKnown RBP eCLIP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms