RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 AFMIDQ63HM1 303 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 RWDD4Q6NW29 188 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 GAREM2Q75VX8 874 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 BZW1Q7L1Q6 419 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 TAB3Q8N5C8 712 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 NAT8LQ8N9F0 302 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 BBOF1Q8ND07 529 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 ZSCAN18Q8TBC5 510 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 CCDC110Q8TBZ0 833 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 TFB1MQ8WVM0 346 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 IGSF8Q969P0 613 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 ZFRQ96KR1 1074 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 EMILIN2Q9BXX0 1053 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 VANGL2Q9ULK5 521 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 RAD54BQ9Y620 910 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 GOLGA6L7A0A1B0GV03 622 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 WASH4PA8MWX3 477 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 H0YGN5 161 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 TMEM63AO94886 807 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 OLFM2O95897 454 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 APOEP02649 317 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 PPP3CCP48454 512 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 ZXDBP98169 803 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 WASHC5Q12768 1159 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 MORF4L2Q15014 288 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 RAP1GAP2Q684P5 730 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 FBXL22Q6P050 247 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 ATP6V0D2Q8N8Y2 350 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 SLC22A17Q8WUG5 538 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 HTR3CQ8WXA8 447 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 P2RY11Q96G91 374 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 ZIM3Q96PE6 472 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 KLF16Q9BXK1 252 aaPredicted RBP16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 NOL6Q9H6R4 1146 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 GKN1Q9NS71 199 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 MTRF1LQ9UGC7 380 aaKnown RBP16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 ATP8A1Q9Y2Q0 1164 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 ASB3Q9Y575 518 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 NFS1Q9Y697 457 aa16.15■□□□□ 0.18
NIPAL3-204ENST00000374399 DRGXA6NNA5 263 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 FGF10O15520 208 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 CNTN5O94779 1100 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 GLUD1P00367 558 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 KPNA1P52294 538 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 ERVK-21P61565 698 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 KCNJ11Q14654 390 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 TAF12Q16514 161 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 ALFQ53S48 1182 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 FAM133BQ5BKY9 247 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 ITIH5Q86UX2 942 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 ZCCHC9Q8N567 271 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 RTL3Q8N8U3 475 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 ADAMTS19Q8TE59 1207 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 DEPDC1BQ8WUY9 529 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 CELF6Q96J87 481 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 PPARGC1AQ9UBK2 798 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 UXTQ9UBK9 157 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 CHD5Q8TDI0 1954 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 H3BQF6 201 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 STC2O76061 302 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 METTL18O95568 372 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 SYF2O95926 243 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 SLC6A4P31645 630 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 GARSP41250 739 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 PMS2P54278 862 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 C5orf22Q49AR2 442 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 NUGGCQ68CJ6 796 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 HEATR6Q6AI08 1181 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 ARHGAP36Q6ZRI8 547 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 TADA2BQ86TJ2 420 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 HDAC11Q96DB2 347 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 TGS1Q96RS0 853 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 CYP2S1Q96SQ9 504 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 SLC39A8Q9C0K1 460 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 LRRC4CQ9HCJ2 640 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 DNAJC17Q9NVM6 304 aaKnown RBP16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 PAK5Q9P286 719 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 SHOC2Q9UQ13 582 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 PCDHA11Q9Y5I1 949 aa16.14■□□□□ 0.17
NIPAL3-204ENST00000374399 PPP1R12AO14974 1030 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 GREM1O60565 184 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 CLASP2O75122 1294 aaKnown RBP16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 MAGEA6P43360 314 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 AP1B1Q10567 949 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 SPDYCQ5MJ68 293 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 ANKRD20A2Q5SQ80 823 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 ANKRD20A1Q5TYW2 823 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 ANKRD20A3Q5VUR7 823 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 ALS2CLQ60I27 953 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 TXNDC8Q6A555 127 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 PDZD4Q76G19 769 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 RELL1Q8IUW5 271 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 PPIL6Q8IXY8 311 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 CEP41Q9BYV8 373 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 CATSPERBQ9H7T0 1116 aa16.13■□□□□ 0.17
NIPAL3-204ENST00000374399 A0A0A0MRY4 1105 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms