RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TCRBV5S1A1TA0A578 114 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 PRR23AA6NEV1 266 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 DDX3XO00571 662 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 GFRA3O60609 400 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 RTN2O75298 545 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 ENDOD1O94919 500 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 MOCS3O95396 460 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 FTLP02792 175 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 ATP5BP06576 529 aaKnown RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 POLR2EP19388 210 aaKnown RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 HOXC13P31276 330 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 CD70P32970 193 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 GGCXP38435 758 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 LMAN2Q12907 356 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 C15orf59Q2T9L4 293 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 HGSNATQ68CP4 663 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 FBXL22Q6P050 247 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 WDR59Q6PJI9 974 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 SERPINA13PQ6UXR4 307 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 LRRC31Q6UY01 552 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 CEP68Q76N32 757 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 BNIPLQ7Z465 357 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 RASSF3Q86WH2 238 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 VSTM4Q8IW00 320 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 FANCMQ8IYD8 2048 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 CCAR2Q8N163 923 aaKnown RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 FAM172AQ8WUF8 416 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 ZNF653Q96CK0 615 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 PARVAQ9NVD7 372 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 KIAA1522Q9P206 1035 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 THAP10Q9P2Z0 257 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 ADAMTS1Q9UHI8 967 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 HCN2Q9UL51 889 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 RAB23Q9ULC3 237 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 SMG5Q9UPR3 1016 aaKnown RBP12.41□□□□□ -0.42
HDAC8-201ENST00000373554 STON1Q9Y6Q2 735 aa12.41□□□□□ -0.42
HDAC8-201ENST00000373554 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 RPP40O75818 363 aaKnown RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 MYBL1P10243 752 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 ZNF143P52747 638 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 OXCT1P55809 520 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 SRSF5Q13243 272 aaKnown RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 SIM2Q14190 667 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 ZNF234Q14588 700 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 TSR1Q2NL82 804 aaKnown RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 FUT11Q495W5 492 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 FNDC3BQ53EP0 1204 aaKnown RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 PPP1R15BQ5SWA1 713 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 TMEM215Q68D42 235 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 SARM1Q6SZW1 724 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 PRR23BQ6ZRT6 265 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 ASCL5Q7RTU5 278 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 ADIPOR2Q86V24 386 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 CIR1Q86X95 450 aaPredicted RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 PGBD3Q8N328 593 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 HMGB4Q8WW32 186 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 GAB3Q8WWW8 586 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 SORCS1Q8WY21 1168 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 IGSF8Q969P0 613 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 C1orf74Q96LT6 269 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 HAPLN3Q96S86 360 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 PPP1R9BQ96SB3 815 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 TPSD1Q9BZJ3 242 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 ANLNQ9NQW6 1124 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 ZNHIT6Q9NWK9 470 aaKnown RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
HDAC8-201ENST00000373554 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 SCINQ9Y6U3 715 aa12.4□□□□□ -0.42
HDAC8-201ENST00000373554 CACNA1GO43497 2377 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 A0A1W2PQF6 199 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 I6L893 689 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 CCP110O43303 1012 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 HRO43593 1189 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 SYNCRIPO60506 623 aaKnown RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 MFAP3LO75121 409 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 CLDN11O75508 207 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 ASLP04424 464 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 PLEKP08567 350 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 CSKP41240 450 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 IL12RB1P42701 662 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 HDAC4P56524 1084 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 RPL7AP62424 266 aaKnown RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 ZNF177Q13360 481 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 SLC12A1Q13621 1099 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 ENPP2Q13822 863 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 C5orf22Q49AR2 442 aa12.39□□□□□ -0.43
HDAC8-201ENST00000373554 USP39Q53GS9 565 aaKnown RBP12.39□□□□□ -0.43
HDAC8-201ENST00000373554 FSCBQ5H9T9 825 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms