RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 CACNA1IQ9P0X4 2223 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 SHROOM3Q8TF72 1996 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 A0A0A0MRY4 1105 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 PI15O43692 258 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 PROSCO94903 275 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 CISD3P0C7P0 127 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 ARHGAP25P42331 645 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 NOP2P46087 812 aaKnown RBP18.9■□□□□ 0.62
PBX3-202ENST00000373482 NRG1Q02297 640 aaPredicted RBP18.9■□□□□ 0.62
PBX3-202ENST00000373482 HADHQ16836 314 aaKnown RBP18.9■□□□□ 0.62
PBX3-202ENST00000373482 C5orf22Q49AR2 442 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 RNF43Q68DV7 783 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 ANKS1BQ7Z6G8 1248 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 C14orf80Q86SX3 495 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 KIAA1328Q86T90 577 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 LRRC8AQ8IWT6 810 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 CCAR2Q8N163 923 aaKnown RBP18.9■□□□□ 0.62
PBX3-202ENST00000373482 FIBINQ8TAL6 211 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 IGSF8Q969P0 613 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 IER2Q9BTL4 223 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 RBM12Q9NTZ6 932 aaKnown RBP18.9■□□□□ 0.62
PBX3-202ENST00000373482 PPARGC1AQ9UBK2 798 aaKnown RBP18.9■□□□□ 0.62
PBX3-202ENST00000373482 CLEC4EQ9ULY5 219 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 AP4E1Q9UPM8 1137 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 SNX10Q9Y5X0 201 aa18.9■□□□□ 0.62
PBX3-202ENST00000373482 A0A0A6YYK5 440 aaPredicted RBP18.89■□□□□ 0.61
PBX3-202ENST00000373482 K7EQS6 105 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 TRIM24O15164 1050 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 ARHGAP6O43182 974 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 CLDN11O75508 207 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 MTA2O94776 668 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 AVPR2P30518 371 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 SSR1P43307 286 aaKnown RBP18.89■□□□□ 0.61
PBX3-202ENST00000373482 CDH4P55283 916 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 OXCT1P55809 520 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 FZD5Q13467 585 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 MESDQ14696 234 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 TCEAL1Q15170 157 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 E2F5Q15329 346 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 CHST9Q7L1S5 443 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 PSTKQ8IV42 348 aaKnown RBP18.89■□□□□ 0.61
PBX3-202ENST00000373482 ARFGAP1Q8N6T3 406 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 TMEM105Q8N8V8 129 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 ACRBPQ8NEB7 543 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 WFIKKN2Q8TEU8 576 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 UCMAQ8WVF2 138 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 ZYG11BQ9C0D3 744 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 CHRDQ9H2X0 955 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 CKAP5Q14008 2032 aa18.89■□□□□ 0.61
PBX3-202ENST00000373482 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 DRGXA6NNA5 263 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 TMEM110-MUSTN1A8MSY1 372 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 RNF40O75150 1001 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 MOCS3O95396 460 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 HLA-FP30511 346 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 L1CAMP32004 1257 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 MAN1A1P33908 653 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 VAV2P52735 878 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 SEC13P55735 322 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 MRPS21P82921 87 aaKnown RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 MESP2Q0VG99 397 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 ZNF177Q13360 481 aaPredicted RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 BOLA3Q53S33 107 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 DAB2IPQ5VWQ8 1189 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 CIR1Q86X95 450 aaPredicted RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 ZNF683Q8IZ20 524 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 AHI1Q8N157 1196 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 TBC1D31Q96DN5 1066 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 PPP1R9BQ96SB3 815 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 EPAS1Q99814 870 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 SNRNP25Q9BV90 132 aaKnown RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 DHX35Q9H5Z1 703 aaKnown RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 RETREG1Q9H6L5 497 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 ABCB8Q9NUT2 735 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 DLGAP2Q9P1A6 1054 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 KIAA1522Q9P206 1035 aaPredicted RBP18.88■□□□□ 0.61
PBX3-202ENST00000373482 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
PBX3-202ENST00000373482 MUC22E2RYF6 1773 aaPredicted RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 CREB3O43889 395 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 ATG13O75143 517 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 LRIG2O94898 1065 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 PTMAP06454 111 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 PABPC1P11940 636 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 HADHBP55084 474 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 SLC12A1Q13621 1099 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 EIF4HQ15056 248 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 GEN1Q17RS7 908 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 RWDD4Q6NW29 188 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 TRMT11Q7Z4G4 463 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 PYROXD2Q8N2H3 581 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.87■□□□□ 0.61
PBX3-202ENST00000373482 WFDC5Q8TCV5 224 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 EZH1Q92800 747 aaPredicted RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 CALR3Q96L12 384 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 PEBP4Q96S96 227 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 ZWILCHQ9H900 591 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 MPP6Q9NZW5 540 aa18.87■□□□□ 0.61
PBX3-202ENST00000373482 REXO2Q9Y3B8 237 aaKnown RBP18.87■□□□□ 0.61
PBX3-202ENST00000373482 EML5Q05BV3 1969 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms