RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
HDLBP-202ENST00000373292 ZNF683Q8IZ20 524 aa11.45□□□□□ -0.58
HDLBP-202ENST00000373292 OR52K2Q8NGK3 314 aa11.45□□□□□ -0.58
HDLBP-202ENST00000373292 SLC39A13Q96H72 371 aa11.45□□□□□ -0.58
HDLBP-202ENST00000373292 KLF6Q99612 283 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-202ENST00000373292 FRMD8P1Q9BZ68 369 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-202ENST00000373292 PPANQ9NQ55 473 aaKnown RBP11.45□□□□□ -0.58
HDLBP-202ENST00000373292 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.45□□□□□ -0.583e-13■□□□□ 9.7
HDLBP-202ENST00000373292 TCRBV9S1A1TA0A576 114 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 C5orf60A6NFR6 353 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 TRDMT1O14717 391 aaKnown RBP11.44□□□□□ -0.58
HDLBP-202ENST00000373292 NR2C2P49116 596 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 C1orf53Q5VUE5 145 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 NADSYN1Q6IA69 706 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 CNKSR3Q6P9H4 555 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SCML4Q8N228 414 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 MGARPQ8TDB4 240 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 PYROXD1Q8WU10 500 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 FBXO32Q969P5 355 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 FUBP3Q96I24 572 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 XPO6Q96QU8 1125 aaKnown RBP11.44□□□□□ -0.58
HDLBP-202ENST00000373292 TMEM109Q9BVC6 243 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SLC39A8Q9C0K1 460 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 PSD3Q9NYI0 1048 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 LCHNA4D1U4 455 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 ANKRD65E5RJM6 399 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SPAG7O75391 227 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 MMP13P45452 471 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 TMED2Q15363 201 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 CENPUQ71F23 418 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 MON1AQ86VX9 555 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SRRM1Q8IYB3 904 aaKnown RBP11.44□□□□□ -0.58
HDLBP-202ENST00000373292 PNPLA1Q8N8W4 532 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 BBOF1Q8ND07 529 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SPATA22Q8NHS9 363 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 CCHCR1Q8TD31 782 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 ARHGEF2Q92974 986 aaKnown RBP11.44□□□□□ -0.58
HDLBP-202ENST00000373292 CFAP36Q96G28 342 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SLC22A12Q96S37 553 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 SELENOSQ9BQE4 189 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 RNF38Q9H0F5 515 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 GRID1Q9ULK0 1009 aa11.44□□□□□ -0.58
HDLBP-202ENST00000373292 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 A0A0A0MRY4 1105 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 DFFAO00273 331 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 HMGA1P17096 107 aaKnown RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 YWHAQP27348 245 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MAGEA3P43357 314 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 NFE2Q16621 373 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 KBTBD12Q3ZCT8 623 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MS4A13Q5J8X5 152 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 SPOUT1Q5T280 376 aaKnown RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 SLC8B1Q6J4K2 584 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MFSD5Q6N075 450 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 FBXO46Q6PJ61 603 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 PSTKQ8IV42 348 aaKnown RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 CFAP52Q8N1V2 620 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 ARNTL2Q8WYA1 636 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 SPATA13Q96N96 652 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 CYP2S1Q96SQ9 504 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MLPHQ9BV36 600 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 FAM129AQ9BZQ8 928 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 FAM107BQ9H098 131 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 C11orf49Q9H6J7 331 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 PAK5Q9P286 719 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 EXOC1LA0A1B0GW35 172 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 C2orf78A6NCI8 922 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 E9PAM4 449 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 GOLGA8RI6L899 631 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MT-CYBP00156 380 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 TIMP1P01033 207 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 GARSP41250 739 aaKnown RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 SGSHP51688 502 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 XRCC4Q13426 336 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 RFWD3Q6PCD5 774 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 HOOK3Q86VS8 718 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 C4orf33Q8N1A6 199 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 ATXN2LQ8WWM7 1075 aaKnown RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 RCOR3Q9P2K3 495 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MTRRQ9UBK8 725 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 MYO9BQ13459 2157 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 CCDC78A2IDD5 438 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 SLC38A8A6NNN8 435 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 CHADO15335 359 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 EIF3HO15372 352 aaKnown RBP eCLIP11.43□□□□□ -0.581e-6■■■■□ 24.6
HDLBP-202ENST00000373292 TOP3BO95985 862 aaKnown RBP11.43□□□□□ -0.58
HDLBP-202ENST00000373292 BMP1P13497 986 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 CCR1P32246 355 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 IFNAR2P48551 515 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 GLUD2P49448 558 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 TUBP50607 506 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 ARL4CP56559 192 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 C10orf120Q5SQS8 335 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 PID1Q7Z2X4 250 aa11.43□□□□□ -0.58
HDLBP-202ENST00000373292 CDKL3Q8IVW4 592 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms