RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 DEFA5Q01523 94 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 CYB5R4Q7L1T6 521 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 IFI30P13284 250 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 PSMC5P62195 406 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 ZIK1Q3SY52 487 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 PDCD4Q53EL6 469 aaKnown RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 N4BP2L1Q5TBK1 243 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 COLGALT2Q8IYK4 626 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 THAP2Q9H0W7 228 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 CCNB1IP1Q9NPC3 277 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 GPATCH8Q9UKJ3 1502 aaKnown RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 CCNT2O60583 730 aaKnown RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 RLN1P04808 185 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 CDK7P50613 346 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 FAM220AQ7Z4H9 259 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 SLC7A14Q8TBB6 771 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 ACAT1P24752 427 aaKnown RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 RGS7P49802 495 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 SKIV2LQ15477 1246 aaKnown RBP15.57■□□□□ 0.08
COL5A1-201ENST00000371817 IQCF2Q8IXL9 164 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 CAB39LQ9H9S4 337 aa15.57■□□□□ 0.08
COL5A1-201ENST00000371817 SRRM3A6NNA2 597 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 MYBL2P10244 700 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 EFNA5P52803 228 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 TAMM41Q96BW9 452 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 SEMA4AQ9H3S1 761 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 RGS17Q9UGC6 210 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PLOD2O00469 737 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 KCNH1O95259 989 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 SERPINF2P08697 491 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 CCR3P51677 355 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PUS3Q9BZE2 481 aaKnown RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 TUBE1Q9UJT0 475 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 SIN3BO75182 1162 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ERCC2P18074 760 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 MSR1P21757 451 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ADSLP30566 484 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 NRG3P56975 720 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 SCN1BQ07699 218 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 SMU1Q2TAY7 513 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 RNF220Q5VTB9 566 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 NUDT18Q6ZVK8 323 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ZNF655Q8N720 491 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 TMIEQ8NEW7 156 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 MAGEC3Q8TD91 643 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 GANQ9H2C0 597 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 DRG1Q9Y295 367 aaKnown RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PLA2G6O60733 806 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ARHGAP36Q6ZRI8 547 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PRR23CQ6ZRP0 262 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ZBTB46Q86UZ6 589 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 AENQ8WTP8 325 aaKnown RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 LYVE1Q9Y5Y7 322 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 AP4B1Q9Y6B7 739 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 CAPN6Q9Y6Q1 641 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 TNRQ92752 1358 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PCNAP12004 261 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PDHA2P29803 388 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 OMPP47874 163 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 TCEAL5Q5H9L2 206 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 GLRA4Q5JXX5 417 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ASB12Q8WXK4 309 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 A1CFQ9NQ94 594 aaKnown RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 DMGDHQ9UI17 866 aaKnown RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 RPS6KA6Q9UK32 745 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 NPHP3-ACAD11A0A0J9YXS1 232 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 FAM172BPA6NC97 362 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 USP17L5A8MUK1 530 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 METTL18O95568 372 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ZNF24P17028 368 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 CAMK2GQ13555 558 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 KCNA10Q16322 511 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 DOK7Q18PE1 504 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ELOA2Q8IYF1 753 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 VANGL2Q9ULK5 521 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 CNTRLQ7Z7A1 2325 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 CYP2E1P05181 493 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 GTF2E2P29084 291 aaKnown RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ARL4DP49703 201 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 CACNB2Q08289 660 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-201ENST00000371817 DLG1Q12959 904 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 PKN1Q16512 942 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 SULT1C3Q6IMI6 304 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 MYO1HQ8N1T3 1032 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 MED11Q9P086 117 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 ANKARQ7Z5J8 1434 aa15.56■□□□□ 0.08
COL5A1-201ENST00000371817 RGSL1A5PLK6 1076 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 NPY2RP49146 381 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PAGE2Q7Z2X7 111 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 LSM14AQ8ND56 463 aaKnown RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SPIRE2Q8WWL2 714 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SLC38A2Q96QD8 506 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 TUBGCP5Q96RT8 1024 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 NMRK2Q9NPI5 230 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 DYRK3O43781 588 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 IFNA7P01567 189 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 MED22Q15528 200 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 FNBP1LQ5T0N5 605 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 GRTP1Q5TC63 336 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms