RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 CHD6Q8TD26 2715 aa13.65□□□□□ -0.22
RPF1-201ENST00000370654 PLXNB3Q9ULL4 1909 aa13.65□□□□□ -0.22
RPF1-201ENST00000370654 TMEM131Q92545 1883 aa13.65□□□□□ -0.23
RPF1-201ENST00000370654 TTC34A8MYJ7 566 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 E5RJQ4 531 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 FBXO21O94952 628 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 FSBPO95073 299 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 SEMA4FO95754 770 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 SLC9A1P19634 815 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 PAK1Q13153 545 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 STILQ15468 1287 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 C9orf64Q5T6V5 341 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 FOXR2Q6PJQ5 311 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 LGI2Q8N0V4 545 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 HJURPQ8NCD3 748 aaPredicted RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 BAHD1Q8TBE0 780 aaPredicted RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 ZNF606Q8WXB4 792 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 GTPBP4Q9BZE4 634 aaKnown RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 ZDHHC5Q9C0B5 715 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 RSPH9Q9H1X1 276 aaPredicted RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 TM9SF3Q9HD45 589 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 TM7SF3Q9NS93 570 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 TOR4AQ9NXH8 423 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 SLCO3A1Q9UIG8 710 aa13.64□□□□□ -0.23
RPF1-201ENST00000370654 HOOK1Q9UJC3 728 aaKnown RBP13.64□□□□□ -0.23
RPF1-201ENST00000370654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.64□□□□□ -0.23
RPF1-201ENST00000370654 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 WNT9AO14904 365 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 IRAK2O43187 625 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 IGLV3-25P01717 112 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 IGHV4-34P06331 123 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
RPF1-201ENST00000370654 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
RPF1-201ENST00000370654 VAV1P15498 845 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 MATKP42679 507 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 IRAK1P51617 712 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 EIF4EBP2Q13542 120 aaPredicted RBP13.63□□□□□ -0.23
RPF1-201ENST00000370654 BECN1Q14457 450 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 DBX2Q6ZNG2 339 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 TMEM110Q86TL2 294 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 IRF2BP1Q8IU81 584 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 SETD7Q8WTS6 366 aaKnown RBP13.63□□□□□ -0.23
RPF1-201ENST00000370654 ADAMTS14Q8WXS8 1223 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 SERPINB11Q96P15 392 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
RPF1-201ENST00000370654 ERVW-1Q9UQF0 538 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 PCDHB9Q9Y5E1 797 aa13.63□□□□□ -0.23
RPF1-201ENST00000370654 C10orf142B7Z368 130 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 MID1O15344 667 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 THAP12O43422 761 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 LUC7L3O95232 432 aaKnown RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 TRUB2O95900 331 aaKnown RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 DNTTP04053 509 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 TACR2P21452 398 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 PPP1R2P41236 205 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 STK19P49842 368 aaPredicted RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 METAP1P53582 386 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 CETN1Q12798 172 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 ZNF423Q2M1K9 1284 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 HNRNPA1L2Q32P51 320 aaKnown RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 PRAMEF14Q5SWL7 426 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 ZNF776Q68DI1 518 aaPredicted RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 RPL10LQ96L21 214 aaKnown RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 FAM129BQ96TA1 746 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 PRMT1Q99873 361 aaKnown RBP13.62□□□□□ -0.23
RPF1-201ENST00000370654 PCED1AQ9H1Q7 454 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 NEUROG2Q9H2A3 272 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 ANKRD6Q9Y2G4 727 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 PLXNA2O75051 1894 aa13.62□□□□□ -0.23
RPF1-201ENST00000370654 A0A1W2PP55 124 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 FAM170AA1A519 330 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 H0Y626 953 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 H0Y8X5 98 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 PLK4O00444 970 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 GRAP2O75791 330 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 TRIM16O95361 564 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 WNT1P04628 370 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 ZNF883P0CG24 379 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 PNMA6AP0CW24 399 aaPredicted RBP13.61□□□□□ -0.23
RPF1-201ENST00000370654 MZF1P28698 734 aaPredicted RBP13.61□□□□□ -0.23
RPF1-201ENST00000370654 GNA15P30679 374 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 GGCXP38435 758 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 AFF3P51826 1226 aaKnown RBP13.61□□□□□ -0.23
RPF1-201ENST00000370654 GALCP54803 685 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 IL9RQ01113 521 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 PDCLQ13371 301 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 NNTQ13423 1086 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 CDH18Q13634 790 aa13.61□□□□□ -0.23
RPF1-201ENST00000370654 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms