RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 CLPBQ9H078 707 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 TPRKBQ9Y3C4 175 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 A0A087WZ62 844 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 C15orf38-AP3S2A0A0A6YYH1 394 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 CCDC154A6NI56 674 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 SNTNA6NMZ2 147 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 B3GAT3O94766 335 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 VTNP04004 478 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 KRT20P35900 424 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 SLC26A2P50443 739 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 SLC6A3Q01959 620 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 UBAP2LQ14157 1087 aaKnown RBP17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 HIST2H2ACQ16777 129 aaPredicted RBP17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 HIST2H2AA3Q6FI13 130 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 ARPINQ7Z6K5 226 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 FBXO39Q8N4B4 442 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 FDXACB1Q9BRP7 624 aaPredicted RBP17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 DPY30Q9C005 99 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 C6orf62Q9GZU0 229 aaPredicted RBP17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 PACSIN3Q9UKS6 424 aa17.49■□□□□ 0.39
PTP4A1-201ENST00000370651 LCA5LO95447 670 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 PLK1P53350 603 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 YWHAZP63104 245 aaKnown RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ARHGAP17Q68EM7 881 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ZDHHC13Q8IUH4 622 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 FNDC5Q8NAU1 212 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 FNIP1Q8TF40 1166 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 TADA1Q96BN2 335 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 PURBQ96QR8 312 aaKnown RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 C1orf50Q9BV19 199 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 UGT2B28Q9BY64 529 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 FHDC1Q9C0D6 1143 aaPredicted RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 RNPEPQ9H4A4 650 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 NOL6Q9H6R4 1146 aaKnown RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 LIMD1Q9UGP4 676 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 A0A1W2PPM1 405 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 A8MUI8 341 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 DNM1LO00429 736 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 HS6ST1O60243 411 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 USP12O75317 370 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 SLC2A4P14672 509 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 BFSP2Q13515 415 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 TRIP4Q15650 581 aaPredicted RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ANKS6Q68DC2 871 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 SCARA3Q6AZY7 606 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 RBM44Q6ZP01 1051 aaKnown RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 MBOAT7Q96N66 472 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 OSBPL7Q9BZF2 842 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 CNGB3Q9NQW8 809 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 E5RJQ4 531 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ATG7O95352 703 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ZNF177Q13360 481 aaPredicted RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 NCF4Q15080 339 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ALYREFQ86V81 257 aaKnown RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 AGBL3Q8NEM8 1001 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 GORASP1Q9BQQ3 440 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 SELENONQ9NZV5 590 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 OR1G1P47890 313 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ACOX2Q99424 681 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 ZBED2Q9BTP6 218 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 STN1Q9H668 368 aaKnown RBP17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 NMRK2Q9NPI5 230 aa17.48■□□□□ 0.39
PTP4A1-201ENST00000370651 CPSF4O95639 269 aaKnown RBP17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 CCDC130P13994 396 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 DNAJB2P25686 324 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 CCR1P32246 355 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 BACE1P56817 501 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 WASHC5Q12768 1159 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ITGADQ13349 1161 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 DDR2Q16832 855 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 NPNTQ6UXI9 565 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 BBS12Q6ZW61 710 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 C11orf74Q86VG3 221 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ASB7Q9H672 318 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 PARVBQ9HBI1 364 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 PTPRHQ9HD43 1115 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 RGS18Q9NS28 235 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 C6orf203Q9P0P8 240 aaPredicted RBP17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 CYP3A7-CYP3A51PA0A087WV96 503 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 RGSL1A5PLK6 1076 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 DCDC2CA8MYV0 355 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ETS2P15036 469 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 CYP3A7P24462 503 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 HPCAP84074 193 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 GTF2BQ00403 316 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 TAF5Q15542 800 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 GJC2Q5T442 439 aaPredicted RBP17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 C4orf32Q8N8J7 132 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 FAM81AQ8TBF8 368 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ACMSDQ8TDX5 336 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 APOL4Q9BPW4 351 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ARL8BQ9NVJ2 186 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 SLC11A2P49281 568 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 BMT2Q1RMZ1 405 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms