RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZNF185O15231 689 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 TLR5O60602 858 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 CILPO75339 1184 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 RHOBTB1O94844 696 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 APODP05090 189 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 MYZAPP0CAP1 466 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 PSMC2P35998 433 aaKnown RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 MPLP40238 635 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 PIK3CAP42336 1068 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 MAP3K7CLP57077 242 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 SLC8A3P57103 927 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 IFRD2Q12894 506 aaPredicted RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 ADAM9Q13443 819 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 SF3A2Q15428 464 aaKnown RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 SOWAHCQ53LP3 525 aaPredicted RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 C2orf27AQ580R0 203 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 RNF187Q5TA31 235 aaPredicted RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 PMS2CLQ68D20 193 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 GPRIN1Q7Z2K8 1008 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 SFTPA1Q8IWL2 248 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 BBS7Q8IWZ6 715 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 GSPT2Q8IYD1 628 aaKnown RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 FAM186BQ8IYM0 893 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 TSTD1Q8NFU3 115 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 CYFIP2Q96F07 1278 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 NT5C1AQ9BXI3 368 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 TMBIM4Q9HC24 238 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 TMEM8AQ9HCN3 771 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 TLR8Q9NR97 1041 aaKnown RBP15.52■□□□□ 0.08
LMO4-201ENST00000370542 SPHK2Q9NRA0 654 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 VPS45Q9NRW7 570 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 OSER1Q9NX31 292 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 STARD13Q9Y3M8 1113 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 USP3Q9Y6I4 520 aa15.52■□□□□ 0.08
LMO4-201ENST00000370542 BCLAF3A2AJT9 711 aaKnown RBP15.51■□□□□ 0.07
LMO4-201ENST00000370542 BTNL10A8MVZ5 291 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 DCLK1O15075 740 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 ADAM23O75077 832 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 DNAJC8O75937 253 aaPredicted RBP15.51■□□□□ 0.07
LMO4-201ENST00000370542 GSTA1P08263 222 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 FAM200BP0CF97 657 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 TRIM49P0CI25 452 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 TRIM49CP0CI26 452 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 GCLMP48507 274 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 ORC1Q13415 861 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 VWA3BQ502W6 1294 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 USP39Q53GS9 565 aaKnown RBP15.51■□□□□ 0.07
LMO4-201ENST00000370542 KRT39Q6A163 491 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 ZC3H3Q8IXZ2 948 aaKnown RBP15.51■□□□□ 0.07
LMO4-201ENST00000370542 CCDC13Q8IYE1 715 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 MDGA1Q8NFP4 955 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 CENPTQ96BT3 561 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 SGSM3Q96HU1 749 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 PBKQ96KB5 322 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 CALR3Q96L12 384 aaKnown RBP15.51■□□□□ 0.07
LMO4-201ENST00000370542 IMPG2Q9BZV3 1241 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 NIF3L1Q9GZT8 377 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 KDM4CQ9H3R0 1056 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 ARHGEF4Q9NR80 690 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 FAM49BQ9NUQ9 324 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 MARK1Q9P0L2 795 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 HCN2Q9UL51 889 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 SH3BP1Q9Y3L3 701 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 NUP205Q92621 2012 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 PLXND1Q9Y4D7 1925 aa15.51■□□□□ 0.07
LMO4-201ENST00000370542 RCCD1A6NED2 376 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 SGK1O00141 431 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 SCAMP3O14828 347 aaKnown RBP15.5■□□□□ 0.07
LMO4-201ENST00000370542 TULP3O75386 442 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 HEXIM1O94992 359 aaKnown RBP15.5■□□□□ 0.07
LMO4-201ENST00000370542 SEC13P55735 322 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 TMEM25Q86YD3 366 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 PARP9Q8IXQ6 854 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 ALLCQ8N6M5 410 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 TXNDC5Q8NBS9 432 aaKnown RBP15.5■□□□□ 0.07
LMO4-201ENST00000370542 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 ADAM33Q9BZ11 813 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 SLC40A1Q9NP59 571 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
LMO4-201ENST00000370542 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 COQ4Q9Y3A0 265 aa15.5■□□□□ 0.07
LMO4-201ENST00000370542 MOCS3O95396 460 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 TBX18O95935 607 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 KRT13P13646 458 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 ATP5C1P36542 298 aaKnown RBP15.49■□□□□ 0.07
LMO4-201ENST00000370542 P2RY2P41231 377 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 EIF3BP55884 814 aaKnown RBP15.49■□□□□ 0.07
LMO4-201ENST00000370542 LRRC63Q05C16 580 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 XRCC4Q13426 336 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 CCDC6Q16204 474 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 PPP2R5EQ16537 467 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 AASDHQ4L235 1098 aaPredicted RBP15.49■□□□□ 0.07
LMO4-201ENST00000370542 EOGTQ5NDL2 527 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 STPG1Q5TH74 334 aa15.49■□□□□ 0.07
LMO4-201ENST00000370542 Q6ZNB5 142 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms