RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ADRA1BP35368 520 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 CCR3P51677 355 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 CSTF1Q05048 431 aaKnown RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 LMAN2Q12907 356 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 DAB2IPQ5VWQ8 1189 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 CCAR2Q8N163 923 aaKnown RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 ARFGAP1Q8N6T3 406 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZNF513Q8N8E2 541 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 BTBD6Q96KE9 485 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 LMLNQ96KR4 655 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 CCDC42Q96M95 316 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 HAPLN3Q96S86 360 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 GGA2Q9UJY4 613 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 STARD13Q9Y3M8 1113 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 ESPNB1AK53 854 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 K7ESF4 209 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 SGK1O00141 431 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 CNTN5O94779 1100 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 HNRNPLP14866 589 aaKnown RBP eCLIP15.56■□□□□ 0.086e-7■■■■■ 29.2
SMPDL3A-201ENST00000368440 MSNP26038 577 aaKnown RBP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 CXCL12P48061 93 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 NUMBP49757 651 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 MRPS21P82921 87 aaKnown RBP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 MTA1Q13330 715 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 C5orf22Q49AR2 442 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 RABGAP1LQ5R372 815 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 SCYL2Q6P3W7 929 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 KIAA0907Q7Z7F0 614 aaPredicted RBP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 TXNDC5Q8NBS9 432 aaKnown RBP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 FIBINQ8TAL6 211 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 SORCS1Q8WY21 1168 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 PRRX2Q99811 253 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 NUP85Q9BW27 656 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 KCNH6Q9H252 994 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 MRPL47Q9HD33 250 aaKnown RBP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 IMPACTQ9P2X3 320 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZKSCAN5Q9Y2L8 839 aa15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 MYO18AQ92614 2054 aaKnown RBP15.56■□□□□ 0.08
SMPDL3A-201ENST00000368440 E9PAM4 449 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 FAM72CH0Y354 149 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 ADAM23O75077 832 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 SP9P0CG40 484 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 PABPC1P11940 636 aaKnown RBP15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 WASP42768 502 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 DMWDQ09019 674 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 CDH18Q13634 790 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 FUT11Q495W5 492 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 ALFQ53S48 1182 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 FAM72AQ5TYM5 149 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 FAM72DQ6L9T8 149 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 NUDT18Q6ZVK8 323 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 CHST9Q7L1S5 443 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 ADIPOR2Q86V24 386 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 FAM72BQ86X60 149 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 OR52K2Q8NGK3 314 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 FNIP1Q8TF40 1166 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 NTAN1Q96AB6 310 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 C1orf74Q96LT6 269 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 TMEM51Q9NW97 253 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 MPP6Q9NZW5 540 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 INTS6Q9UL03 887 aaKnown RBP15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 MMP17Q9ULZ9 603 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 MUC6Q6W4X9 2439 aa15.55■□□□□ 0.08
SMPDL3A-201ENST00000368440 A0A1B0GVM2 712 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 TCAF2A6NFQ2 919 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 H0Y626 953 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 SRGAP2O75044 1071 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 ATG13O75143 517 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 DMC1Q14565 340 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 ARL13BQ3SXY8 428 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 TTC39BQ5VTQ0 682 aaPredicted RBP15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 CXorf57Q6NSI4 855 aaKnown RBP15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 TMEM92Q6UXU6 159 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 SYT13Q7L8C5 426 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 LRRC8AQ8IWT6 810 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 PYROXD2Q8N2H3 581 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 ACDQ96AP0 544 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 HHIPQ96QV1 700 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 PEBP4Q96S96 227 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 CIPCQ9C0C6 399 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 FAM86C1Q9NVL1 165 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 ELOVL2Q9NXB9 296 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 FBXO4Q9UKT5 387 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 EML5Q05BV3 1969 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 FANCMQ8IYD8 2048 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 IGLV3-10A0A075B6K4 115 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 DRGXA6NNA5 263 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 WASH3PC4AMC7 463 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 PAPSS2O95340 614 aaPredicted RBP15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 H2AFZP0C0S5 128 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 PTPN5P54829 565 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 GSDMDP57764 484 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 SCAPQ12770 1279 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 MANEALQ5VSG8 457 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 H2AFVQ71UI9 128 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 SLFN11Q7Z7L1 901 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms