RNA–Protein interactions for RNA: ENST00000368202.4

PTPRK-201, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 526 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-201ENST00000368202 RBP3P10745 1247 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 RHOQP17081 205 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 MX2P20592 715 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 HOXC13P31276 330 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ACTN2P35609 894 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 DR1Q01658 176 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ADGRE1Q14246 886 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 SIX1Q15475 284 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 MANEALQ5VSG8 457 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 NADSYN1Q6IA69 706 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 RFWD3Q6PCD5 774 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 C14orf80Q86SX3 495 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ZNF354CQ86Y25 554 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 CDKL3Q8IVW4 592 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 PQLC3Q8N755 202 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 RTL3Q8N8U3 475 aaKnown RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 HJURPQ8NCD3 748 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 CCNYQ8ND76 341 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 MYRIPQ8NFW9 859 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 ATL2Q8NHH9 583 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 RSAD2Q8WXG1 361 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 USP13Q92995 863 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 PRMT1Q99873 361 aaKnown RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 FAM118BQ9BPY3 351 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 GDE1Q9NZC3 331 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 MPP6Q9NZW5 540 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 R3HDM2Q9Y2K5 976 aaKnown RBP12.54□□□□□ -0.4
PTPRK-201ENST00000368202 LAMA3Q16787 3333 aa12.54□□□□□ -0.4
PTPRK-201ENST00000368202 IGLV3-10A0A075B6K4 115 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 FAM187AA6NFU0 413 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 WASH4PA8MWX3 477 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 DFFAO00273 331 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 MFSD11O43934 449 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 RHOXF2BP0C7M4 288 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 TCF3P15923 654 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 PECAM1P16284 738 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 WEE1P30291 646 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 OR1E1P30953 314 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 SLC6A4P31645 630 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 MAPKAPK2P49137 400 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 VCPP55072 806 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CDH4P55283 916 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 USP4Q13107 963 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 XRCC4Q13426 336 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 PDK1Q15118 436 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 HEATR6Q6AI08 1181 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 Q6ZNB5 142 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 TFAP2DQ7Z6R9 452 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 NPAS3Q8IXF0 933 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CPXM2Q8N436 756 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 NOA1Q8NC60 698 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 TFB1MQ8WVM0 346 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 FGF13Q92913 245 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 IGSF8Q969P0 613 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 E2F7Q96AV8 911 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 TMA16Q96EY4 203 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 NECTIN4Q96NY8 510 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 RHOXF2Q9BQY4 288 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 LRRC1Q9BTT6 524 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 ETNK2Q9NVF9 386 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 TMEM248Q9NWD8 314 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 SAE1Q9UBE0 346 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 PCYOX1Q9UHG3 505 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 STOML2Q9UJZ1 356 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 DNPEPQ9ULA0 475 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 CDH7Q9ULB5 785 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 DRG1Q9Y295 367 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
PTPRK-201ENST00000368202 ZFP37Q9Y6Q3 630 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-201ENST00000368202 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 A0A1B0GVM2 712 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 TCAF2A6NFQ2 919 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 ARHGAP42A6NI28 874 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 H0Y626 953 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 NRG2O14511 850 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms