RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CXCL9Q07325 125 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 GALNTL6Q49A17 601 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 PABPC1LQ4VXU2 614 aaKnown RBP7.46□□□□□ -1.21
VTA1-202ENST00000367630 GPIHBP1Q8IV16 184 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 SCML4Q8N228 414 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 MINDY2Q8NBR6 621 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 SHISA4Q96DD7 197 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 TMEM121Q9BTD3 319 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 APOL6Q9BWW8 343 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 EIF3LQ9Y262 564 aaKnown RBP7.46□□□□□ -1.21
VTA1-202ENST00000367630 DNAJC16Q9Y2G8 782 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 RPS6KL1Q9Y6S9 549 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 DHX15O43143 795 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 PFDN1O60925 122 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 OAS1P00973 400 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 INHBEP58166 350 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 RFTN1Q14699 578 aaPredicted RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 R3HDM1Q15032 1099 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 SVOPQ8N4V2 548 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 HEXDCQ8WVB3 486 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 WDCPQ9H6R7 721 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 SETD4Q9NVD3 440 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 VPS26AO75436 327 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 PARNO95453 639 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 PENKP01210 267 aaPredicted RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 SHBGP04278 402 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 PRKCHP24723 683 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CHN2P52757 468 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CLEC10AQ8IUN9 316 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CCDC60Q8IWA6 550 aaPredicted RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 CERS2Q96G23 380 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CD248Q9HCU0 757 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 XPNPEP3Q9NQH7 507 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 TAS2R14Q9NYV8 317 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.46□□□□□ -1.223e-6■■■■□ 22.2
VTA1-202ENST00000367630 DNAJB5O75953 348 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 MLYCDO95822 493 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 DPEP1P16444 411 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 IBSPP21815 317 aaPredicted RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 ADORA2BP29275 332 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CCR1P32246 355 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 RPL5P46777 297 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 KLF1Q13351 362 aaPredicted RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 PDAP1Q13442 181 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 VEPH1Q14D04 833 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 IRAK1BP1Q5VVH5 260 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 KCNMB4Q86W47 210 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 NAT8LQ8N9F0 302 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 OR9Q1Q8NGQ5 310 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 ATG4AQ8WYN0 398 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 ELMO2Q96JJ3 720 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 COLEC11Q9BWP8 271 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 EMILIN2Q9BXX0 1053 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 MRPL9Q9BYD2 267 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 SLC13A1Q9BZW2 595 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 BTBD7Q9P203 1132 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 SALL4Q9UJQ4 1053 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 C2orf81A6NN90 581 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 GNGT2O14610 69 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 GRIN3BO60391 1043 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 MGEA5O60502 916 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 RPL3P39023 403 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 NDST1P52848 882 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 TBL3Q12788 808 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 DCLRE1AQ6PJP8 1040 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 C10orf82Q8WW14 230 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 TBC1D10AQ9BXI6 508 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 UGT2B28Q9BY64 529 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 CDH19Q9H159 772 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 MRPL46Q9H2W6 279 aaKnown RBP7.46□□□□□ -1.22
VTA1-202ENST00000367630 PSMD13Q9UNM6 376 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 DMTF1Q9Y222 760 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 TRPV2Q9Y5S1 764 aa7.46□□□□□ -1.22
VTA1-202ENST00000367630 HDAC3O15379 428 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 IFNA14P01570 189 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 CCNCP24863 283 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 ADRA1DP25100 572 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 POLE2P56282 527 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 DLG4P78352 724 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 OASLQ15646 514 aaKnown RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 GRIK4Q16099 956 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 TNFAIP8L3Q5GJ75 292 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 CLNKQ7Z7G1 428 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 PCSK9Q8NBP7 692 aaKnown RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 SPOCK2Q92563 424 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 PTCD3Q96EY7 689 aaKnown RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 CDT1Q9H211 546 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 RHOJQ9H4E5 214 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 ANKHQ9HCJ1 492 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 LRRC4CQ9HCJ2 640 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 TMEM216Q9P0N5 145 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 PIN4Q9Y237 131 aaKnown RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 FARP1Q9Y4F1 1045 aaPredicted RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 CRYBB1P53674 252 aaPredicted RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 PNLIPRP1P54315 467 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 TRIP10Q15642 601 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 SLC35G1Q2M3R5 365 aa7.45□□□□□ -1.22
VTA1-202ENST00000367630 N4BP2L1Q5TBK1 243 aaPredicted RBP7.45□□□□□ -1.22
VTA1-202ENST00000367630 LMBRD2Q68DH5 695 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms