RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 TMEM143Q96AN5 459 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 PLGRKTQ9HBL7 147 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 MYH8P13535 1937 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 HLA-DQA2P01906 255 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 UMPSP11172 480 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 TNNI3P19429 210 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CDH3P22223 829 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■■■□□ 19.1
TPR-201ENST00000367478 TNK2Q07912 1038 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 ZDHHC17Q8IUH5 632 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CCNB1IP1Q9NPC3 277 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 TIMMDC1Q9NPL8 285 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 ADSSP30520 456 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 PTCD3Q96EY7 689 aaKnown RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 TBX20Q9UMR3 447 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CDC42BPBQ9Y5S2 1711 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 DHFRP00374 187 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CLK3P49761 638 aaKnown RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 PYDC2Q56P42 97 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CYP4F12Q9HCS2 524 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 DPP3Q9NY33 737 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 UBQLN1Q9UMX0 589 aaKnown RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 ACSL4O60488 711 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PRMT3O60678 531 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 ACADMP11310 421 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 LHX1P48742 406 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 AKR1D1P51857 326 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 TMCC2O75069 709 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 CYP7B1O75881 506 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 NUDT14O95848 222 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 SERPINF2P08697 491 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 SCAIQ8N9R8 606 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 OXNAD1Q96HP4 312 aaPredicted RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 ACOX2Q99424 681 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 H7C1W4 665 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 GLRBP48167 497 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 DDI2Q5TDH0 399 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 ZNF557Q8N988 423 aaPredicted RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 DNAJC1Q96KC8 554 aaKnown RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 PP2D1A8MPX8 630 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 VDRP11473 427 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PRKCEQ02156 737 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 NAA30Q147X3 362 aaPredicted RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 ZNHIT3Q15649 155 aaPredicted RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 RFX4Q33E94 735 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 C11orf63Q6NUN7 778 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 TMEM169Q96HH4 297 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 KCNK4Q9NYG8 393 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 TRHDEQ9UKU6 1024 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 SSR3Q9UNL2 185 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 RAG1P15918 1043 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PLD1Q13393 1074 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 STK32AQ8WU08 396 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 TBCDQ9BTW9 1192 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PGRMC2O15173 223 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 OMPP47874 163 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 RPS6KA3P51812 740 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 NR1H2P55055 460 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 BTN3A2P78410 334 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 TCHHL1Q5QJ38 904 aaPredicted RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 POTEHQ6S545 545 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 OLFML1Q6UWY5 402 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 PACS1Q6VY07 963 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 APOPT1Q96IL0 206 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 OR56A5P0C7T3 313 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 OGNP20774 298 aaKnown RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 UGT1A5P35504 534 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 NME5P56597 212 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 BST2Q10589 180 aaKnown RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 CDH17Q12864 832 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 NR1D2Q14995 579 aa12.67□□□□□ -0.38
TPR-201ENST00000367478 DDX20Q9UHI6 824 aaKnown RBP12.67□□□□□ -0.38
TPR-201ENST00000367478 CARNS1A5YM72 827 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 ALDH3A2P51648 485 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 METTL21EPA6NDL7 271 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 AP3S2P59780 193 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 MYL6P60660 151 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 ITIH5Q86UX2 942 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 SLC39A8Q9C0K1 460 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 ARHGEF5Q12774 1597 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 AP1G2O75843 785 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 GP5P40197 560 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms