RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 DDX43Q9NXZ2 648 aaKnown RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 GALNT8Q9NY28 637 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 HACL1Q9UJ83 578 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 MRPL42Q9Y6G3 142 aaKnown RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 A0A096LPK6 155 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 STX16-NPEPL1H3BU86 382 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 RNF103O00237 685 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 ACKR2O00590 384 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 PAPSS1O43252 624 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 FARP2O94887 1054 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 CSPG5O95196 566 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 VTNP04004 478 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 TPH1P17752 444 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 IL4RP24394 825 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 TMEM198Q66K66 360 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 LAYNQ6UX15 382 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 FAM43BQ6ZT52 329 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 PQLC1Q8N2U9 271 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 DCLK2Q8N568 766 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 OR52K1Q8NGK4 314 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 MIPOL1Q8TD10 442 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 NDRG1Q92597 394 aaKnown RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 COPS5Q92905 334 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 RCN3Q96D15 328 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 PCYT2Q99447 389 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 TRPV6Q9H1D0 765 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 PREBQ9HCU5 417 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 GGA3Q9NZ52 723 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 TLK1Q9UKI8 766 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 BARX2Q9UMQ3 279 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 SORCS3Q9UPU3 1222 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 AP4B1Q9Y6B7 739 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 A0A087WZ62 844 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 BCLAF3A2AJT9 711 aaKnown RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 KPNA7A9QM74 516 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 HCRTO43612 131 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 ZBTB14O43829 449 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 CHRNGP07510 517 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 MPSTP25325 297 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 HDAC4P56524 1084 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 IRF9Q00978 393 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 GK3PQ14409 553 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 PDK1Q15118 436 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 TLR1Q15399 786 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 DCAF15Q66K64 600 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 KRT80Q6KB66 452 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 BNC2Q6ZN30 1099 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 PLD6Q8N2A8 252 aaKnown RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 SPATA6LQ8N4H0 392 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 ACTRT2Q8TDY3 377 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 GMLQ99445 158 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 AGAP2Q99490 1192 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 FDXACB1Q9BRP7 624 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 PDGFDQ9GZP0 370 aaPredicted RBP8.39□□□□□ -1.07
CD46-208ENST00000367042 FAM96AQ9H5X1 160 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 PLAC1Q9HBJ0 212 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 TMPRSS4Q9NRS4 437 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 DNAJB4Q9UDY4 337 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 EMCNQ9ULC0 261 aa8.39□□□□□ -1.07
CD46-208ENST00000367042 ADCY6O43306 1168 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 MT-CO1P00395 513 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 FAM200BP0CF97 657 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 SCNN1BP51168 640 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 PRAMEP78395 509 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 SLC6A3Q01959 620 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 EN1Q05925 392 aaPredicted RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 TMEM62Q0P6H9 643 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 FKBP1CQ5VVH2 108 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 TMC7Q7Z402 723 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 MAVSQ7Z434 540 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 KDELC2Q7Z4H8 507 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 CCDC185Q8N715 623 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 KYQ8NBH2 561 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 DTNBP1Q96EV8 351 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 ILKAPQ9H0C8 392 aaPredicted RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 CAAP1Q9H8G2 361 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 HOXC10Q9NYD6 342 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 GTSE1Q9NYZ3 720 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 PHGDHO43175 533 aaKnown RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 B4GALT4O60513 344 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 CCNT2O60583 730 aaKnown RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 IL18RAPO95256 599 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 CD1EP15812 388 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 XRCC1P18887 633 aaPredicted RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 CNTFP26441 200 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 SOX11P35716 441 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 GP5P40197 560 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 NAGLUP54802 743 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 CYLC2Q14093 348 aaPredicted RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 TAZQ16635 292 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 NADK2Q4G0N4 442 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 SH2D4BQ5SQS7 431 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 GADL1Q6ZQY3 521 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 ZNF534Q76KX8 674 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms