RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PDK1Q15118 436 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 LY6KQ17RY6 165 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 NBPF12Q5TAG4 269 aaPredicted RBP13.94□□□□□ -0.18
PRKN-205ENST00000366897 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
PRKN-205ENST00000366897 CDRT15Q96T59 188 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 CDT1Q9H211 546 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 RPF1Q9H9Y2 349 aaKnown RBP13.94□□□□□ -0.18
PRKN-205ENST00000366897 SYBUQ9NX95 663 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 AP4B1Q9Y6B7 739 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 MGAMO43451 1857 aa13.94□□□□□ -0.18
PRKN-205ENST00000366897 PEX1O43933 1283 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 LTFP02788 710 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 PFKMP08237 780 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SAT1P21673 171 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 EPHA3P29320 983 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SDC4P31431 198 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MTTPP55157 894 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 HDAC4P56524 1084 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MAP7Q14244 749 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 STXBP2Q15833 593 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 GOLGA7BQ2TAP0 167 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MYLK3Q32MK0 819 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MPZL3Q6UWV2 235 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 TP53INP2Q8IXH6 220 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MCUQ8NE86 351 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 AGBL3Q8NEM8 1001 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 RAB3IL1Q8TBN0 382 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 JADE3Q92613 823 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 ATP2A3Q93084 1043 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 NIFKQ9BYG3 293 aaKnown RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 ARHGAP26Q9UNA1 814 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SORCS3Q9UPU3 1222 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SYNJ2BP-COX16A0A087WUM0 186 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 GOLGA8TH3BQL2 631 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MAFO75444 373 aaPredicted RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 CPA3P15088 417 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 TGM2P21980 687 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 CDKL1Q00532 357 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 ZBTB8OSQ8IWT0 167 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRKN-205ENST00000366897 ACVR1CQ8NER5 493 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 AGAP3Q96P47 875 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 UNKQ9C0B0 810 aaKnown RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 COX16Q9P0S2 106 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 FBXO21O94952 628 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 SRGAP2BP0DMP2 458 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 ENO3P13929 434 aaPredicted RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 MPSTP25325 297 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 BACE1P56817 501 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MYBPC1Q00872 1141 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 MS4A2Q01362 244 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 CDK18Q07002 472 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 PPP2R5DQ14738 602 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 OGFRL1Q5TC84 451 aaPredicted RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 ACOT1Q86TX2 421 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 LILRA2Q8N149 483 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 LRRC39Q96DD0 335 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 DGCR14Q96DF8 476 aaKnown RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 AGAP2Q99490 1192 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 CCDC28BQ9BUN5 200 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 LIN28AQ9H9Z2 209 aaKnown RBP13.93□□□□□ -0.18
PRKN-205ENST00000366897 MTMR10Q9NXD2 777 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 TXNDC16Q9P2K2 825 aa13.93□□□□□ -0.18
PRKN-205ENST00000366897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 NOP56O00567 594 aaKnown RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 GABBR2O75899 941 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 FARP2O94887 1054 aaPredicted RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 EFNA5P52803 228 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 IGBP1P78318 339 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 NIPAL4Q0D2K0 466 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 FLOT2Q14254 428 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 MYBPC3Q14896 1274 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 ACAP1Q15027 740 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 AMHR2Q16671 573 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 PPP1R26Q5T8A7 1209 aaPredicted RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 FAM219BQ5XKK7 198 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 AMIGO2Q86SJ2 522 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 CDKL3Q8IVW4 592 aaPredicted RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 CEP70Q8NHQ1 597 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 ARNTL2Q8WYA1 636 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 KHSRPQ92945 711 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRKN-205ENST00000366897 LENG1Q96BZ8 264 aaPredicted RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 CPB2Q96IY4 423 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 FRMD8Q9BZ67 464 aaPredicted RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 MYOZ2Q9NPC6 264 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 SNX15Q9NRS6 342 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 SMIM31A0A1B0GVY4 71 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms