RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ZNF518BQ9C0D4 1074 aa20.15■□□□□ 0.82
TRIM58-201ENST00000366481 NRDE2Q9H7Z3 1164 aa20.15■□□□□ 0.82
TRIM58-201ENST00000366481 PSMD13Q9UNM6 376 aa20.15■□□□□ 0.82
TRIM58-201ENST00000366481 E7ESA3 106 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 RFPL1O75677 317 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 CSH1P0DML2 217 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 CSH2P0DML3 217 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 NR1H2P55055 460 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 DDI1Q8WTU0 396 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 EME1Q96AY2 570 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 CDRT15Q96T59 188 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 RRN3Q9NYV6 651 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 AKT3Q9Y243 479 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 MFHAS1Q9Y4C4 1052 aa20.14■□□□□ 0.82
TRIM58-201ENST00000366481 TFPTP0C1Z6 253 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 PSMD7P51665 324 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 TEX44Q53QW1 395 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 GLRA4Q5JXX5 417 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 NIPA2Q8N8Q9 360 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 GPR20Q99678 358 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 SPATC1LQ9H0A9 340 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 SMYD2Q9NRG4 433 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 TSPAN16Q9UKR8 245 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 TEX264Q9Y6I9 313 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 MYO18AQ92614 2054 aaKnown RBP20.14■□□□□ 0.81
TRIM58-201ENST00000366481 FOXD2O60548 495 aaPredicted RBP20.14■□□□□ 0.81
TRIM58-201ENST00000366481 SPAG6O75602 509 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 GPD2P43304 727 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 MYBPC1Q00872 1141 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 SNAPC2Q13487 334 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 ITPRIPL1Q6GPH6 555 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 PATL1Q86TB9 770 aaKnown RBP20.14■□□□□ 0.81
TRIM58-201ENST00000366481 ACOT1Q86TX2 421 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 MARVELD2Q8N4S9 558 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 GIPC3Q8TF64 312 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 HPDLQ96IR7 371 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 SEMA6AQ9H2E6 1030 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 TXNRD2Q9NNW7 524 aa20.14■□□□□ 0.81
TRIM58-201ENST00000366481 RSL24D1Q9UHA3 163 aaKnown RBP20.14■□□□□ 0.81
TRIM58-201ENST00000366481 SF3B1O75533 1304 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIM58-201ENST00000366481 A0A1B0GTW7 788 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ADM5C9JUS6 153 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 PSMC3P17980 439 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ICAM3P32942 547 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 TAP1Q03518 808 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 Q3C1V9 767 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 NXNQ6DKJ4 435 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ZBTB46Q86UZ6 589 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 CLEC4CQ8WTT0 213 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ATXN7L3BQ96GX2 97 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 SERPINI1Q99574 410 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 EPB41L1Q9H4G0 881 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ITGA11Q9UKX5 1188 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 SORCS3Q9UPU3 1222 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ACKR2O00590 384 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 PPEF2O14830 753 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 MED7O43513 233 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ZBED1O96006 694 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 COX4I1P13073 169 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 SH2D5Q6ZV89 423 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 PTAR1Q7Z6K3 402 aaPredicted RBP20.13■□□□□ 0.81
TRIM58-201ENST00000366481 DNERQ8NFT8 737 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 TSPAN14Q8NG11 270 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ZSCAN18Q8TBC5 510 aaPredicted RBP20.13■□□□□ 0.81
TRIM58-201ENST00000366481 TFB1MQ8WVM0 346 aaKnown RBP20.13■□□□□ 0.81
TRIM58-201ENST00000366481 TMIGD2Q96BF3 282 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 MAML3Q96JK9 1138 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 ELP3Q9H9T3 547 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 PPME1Q9Y570 386 aa20.13■□□□□ 0.81
TRIM58-201ENST00000366481 IDH3AP50213 366 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 BCAR1P56945 870 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 LBX2Q6XYB7 198 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 CMASQ8NFW8 434 aaPredicted RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 TXNDC16Q9P2K2 825 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ZNF112Q9UJU3 913 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 HES2Q9Y543 173 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 HSPA4LO95757 839 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 CDH5P33151 784 aaPredicted RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 PRAMEP78395 509 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 NLRP7Q8WX94 980 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 NDRG1Q92597 394 aaKnown RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 NUF2Q9BZD4 464 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ZNF180Q9UJW8 692 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ADCY6O43306 1168 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 GPD1P21695 349 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 YWHAZP63104 245 aaKnown RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 MXD4Q14582 209 aaPredicted RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 FSCBQ5H9T9 825 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 C1QTNF12Q5T7M4 302 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 PMF1Q6P1K2 205 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ZNF410Q86VK4 478 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 BHLHE22Q8NFJ8 381 aaPredicted RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 HAUS8Q9BT25 410 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 SENP6Q9GZR1 1112 aaPredicted RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ACSS2Q9NR19 701 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ASNSD1Q9NWL6 643 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 C6orf203Q9P0P8 240 aaPredicted RBP20.12■□□□□ 0.81
TRIM58-201ENST00000366481 TTLL3Q9Y4R7 772 aa20.12■□□□□ 0.81
TRIM58-201ENST00000366481 ARID2Q68CP9 1835 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms