RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 KLHL17Q6TDP4 642 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 KIAA1324Q6UXG2 1013 aaKnown RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 RAB11FIP2Q7L804 512 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 CCDC117Q8IWD4 279 aaPredicted RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 ADGRF4Q8IZF3 695 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 TBC1D3Q8IZP1 549 aaPredicted RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 ENAHQ8N8S7 591 aaPredicted RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 OR52N4Q8NGI2 321 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 OTUD7AQ8TE49 926 aaPredicted RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 KAT2BQ92831 832 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 ATP2A3Q93084 1043 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 TMEM79Q9BSE2 394 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 PIMREGQ9BSJ6 248 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 BRD8Q9H0E9 1235 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 OSBPL5Q9H0X9 879 aaPredicted RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 ELAC1Q9H777 363 aaKnown RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 SFXN1Q9H9B4 322 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 ERVK-5Q9HDB9 667 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 LIN7CQ9NUP9 197 aaKnown RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 PCDHA10Q9Y5I2 948 aa3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 COPG1Q9Y678 874 aaKnown RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 TTBK1Q5TCY1 1321 aaPredicted RBP3.61□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRBV5-3A0A0A0MS03 114 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 MBD3L5A6NJ08 208 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 C3orf70A6NLC5 250 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 WNT1P04628 370 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 VEGFAP15692 232 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 NR4A2P43354 598 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 CDK7P50613 346 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 POLE2P56282 527 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 B4GALNT1Q00973 533 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 SRSF1Q07955 248 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 FOXO1Q12778 655 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 OS9Q13438 667 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 MIDNQ504T8 468 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 KIAA1755Q5JYT7 1200 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM83BQ5T0W9 1011 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 TANGO2Q6ICL3 276 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 JMJD6Q6NYC1 403 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 RTL10Q7L3V2 364 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 RRAGAQ7L523 313 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 MDGA2Q7Z553 956 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 MRPL10Q7Z7H8 261 aaKnown RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 ADPRHL1Q8NDY3 354 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 ZNF548Q8NEK5 533 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 MSI2Q96DH6 328 aaKnown RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 FCRL4Q96PJ5 515 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 ARPC5LQ9BPX5 153 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 HTATIP2Q9BUP3 242 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 ABHD16BQ9H3Z7 469 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 PTPRHQ9HD43 1115 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 PAPOLBQ9NRJ5 636 aaKnown RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 MSRB1Q9NZV6 116 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 IPO11Q9UI26 975 aaKnown RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 C19orf53Q9UNZ5 99 aaPredicted RBP3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 COMMD10Q9Y6G5 202 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 LMTK3Q96Q04 1460 aa3.6□□□□□ -1.83
RNU4-48P-201ENST00000365559 A0A1W2PPC1 479 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 HMX3A6NHT5 357 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 EFCAB8A8MWE9 144 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 F8W810 466 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 IPO5O00410 1097 aaKnown RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 SOCS2O14508 198 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TLX3O43711 291 aaPredicted RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 RCAN1P53805 252 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 KRT72Q14CN4 511 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 RPS6KA2Q15349 733 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TIGD6Q17RP2 521 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TMEM88Q6PEY1 159 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 IRF2BP2Q7Z5L9 587 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 PAQR4Q8N4S7 273 aaPredicted RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 MYCT1Q8N699 235 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM47BQ8NA70 645 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 IP6K1Q92551 441 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 KAT2AQ92830 837 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 EME1Q96AY2 570 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 C3orf49Q96BT1 292 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 ZFYVE19Q96K21 471 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRAPPC9Q96Q05 1148 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRMOQ9BU70 441 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TUBB6Q9BUF5 446 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 DDX23Q9BUQ8 820 aaKnown RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TMEM120AQ9BXJ8 343 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 ARHGAP39Q9C0H5 1083 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 FOXP1Q9H334 677 aaPredicted RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 AAMDCQ9H7C9 122 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 IL21RQ9HBE5 538 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 TXNRD2Q9NNW7 524 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 KCND3Q9UK17 655 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 UTS2RQ9UKP6 389 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 AGO2Q9UKV8 859 aaKnown RBP3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 RCE1Q9Y256 329 aa3.59□□□□□ -1.83
RNU4-48P-201ENST00000365559 A0A0G2JK05 382 aa3.58□□□□□ -1.84
RNU4-48P-201ENST00000365559 KIR2DS5A0A0G2JLQ3 304 aa3.58□□□□□ -1.84
RNU4-48P-201ENST00000365559 CXorf65A6NEN9 183 aa3.58□□□□□ -1.84
RNU4-48P-201ENST00000365559 ZNF814B7Z6K7 855 aa3.58□□□□□ -1.84
RNU4-48P-201ENST00000365559 KIR2DS3K7RE56 304 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms