RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SPARCL1Q14515 664 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 KIAA1755Q5JYT7 1200 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 ZNF569Q5MCW4 686 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 C6orf10Q5SRN2 563 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 DAB2IPQ5VWQ8 1189 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 ISM2Q6H9L7 571 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 TMEM88Q6PEY1 159 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 ZNF517Q6ZMY9 492 aaPredicted RBP4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 B4GALNT4Q76KP1 1039 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 DDIASQ8IXT1 998 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 CCDC146Q8IYE0 955 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 SAMD14Q8IZD0 417 aaPredicted RBP4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 ZNF527Q8NB42 609 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 MSI2Q96DH6 328 aaKnown RBP4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 MECRQ9BV79 373 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 OSBPL5Q9H0X9 879 aaPredicted RBP4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 OBP2BQ9NPH6 170 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 ANAPC4Q9UJX5 808 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 LAMP3Q9UQV4 416 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 ZBTB1Q9Y2K1 713 aa4.59□□□□□ -1.67
RNU6-553P-201ENST00000364047 TBC1D3DA0A087WVF3 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3IA0A087WXS9 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3EA0A087X179 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3KA0A087X1G2 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3BA6NDS4 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3FA6NER0 549 aaPredicted RBP4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3LB9A6J9 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 WNT1P04628 370 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 CYP3A4P08684 503 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 FGF2P09038 288 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3HP0C7X1 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 FOXL2P58012 376 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM3BP58499 235 aaPredicted RBP4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 BTBD16Q32M84 506 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 PIK3CD-AS1Q5SR53 167 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 SYCP2LQ5T4T6 812 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3GQ6DHY5 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3CQ6IPX1 549 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 CYB5R4Q7L1T6 521 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TRAPPC11Q7Z392 1133 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBC1D3Q8IZP1 549 aaPredicted RBP4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 PAQR4Q8N4S7 273 aaPredicted RBP4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 TMEM199Q8N511 208 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM71BQ8TC56 605 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 LRCH1Q9Y2L9 728 aa4.58□□□□□ -1.68
RNU6-553P-201ENST00000364047 A0A087WV62 115 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 CYP3A7-CYP3A51PA0A087WV96 503 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 A6NNC1 897 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 SLC38A8A6NNN8 435 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 LGALS16A8MUM7 142 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 ATG13O75143 517 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 LARGE1O95461 756 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 SETSIPP0DME0 302 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 CHRNB1P11230 501 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 CYP3A7P24462 503 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 SERPINB3P29508 390 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 RBM6P78332 1123 aaKnown RBP4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 GAD2Q05329 585 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 PPATQ06203 517 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 RAPGEF1Q13905 1077 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 PTGR1Q14914 329 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 NUGGCQ68CJ6 796 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 PGBD2Q6P3X8 592 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 C9orf47Q6ZRZ4 202 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 MORC1Q86VD1 984 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 ZDHHC17Q8IUH5 632 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 HMGB4Q8WW32 186 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 CLMNQ96JQ2 1002 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 WDR83Q9BRX9 315 aaKnown RBP4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 TMEM120AQ9BXJ8 343 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 MLXIPQ9HAP2 919 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 FZD3Q9NPG1 666 aa4.57□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A18PA6NE21 464 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 CXorf65A6NEN9 183 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A16PA6NEW6 464 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A9PA6NNJ1 464 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A5PA8MXJ8 464 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 ALPLP05186 524 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A15PP0C7V4 464 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A14PP0C7W9 464 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 TNFAIP2Q03169 654 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 HDAC1Q13547 482 aaPredicted RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 PTK2BQ14289 1009 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 GALNT3Q14435 633 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 PFKFB4Q16877 469 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 C10orf76Q5T2E6 689 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 ATPAF1Q5TC12 328 aaPredicted RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 TTLL5Q6EMB2 1281 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 ZNF549Q6P9A3 640 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 LVRNQ6Q4G3 990 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 TOGARAM2Q6ZUX3 1019 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 BHLHA9Q7RTU4 235 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 MDGA2Q7Z553 956 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 EXD3Q8N9H8 876 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 OR1N1Q8NGS0 311 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 CLEC4CQ8WTT0 213 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 CENPIQ92674 756 aaPredicted RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 RSC1A1Q92681 617 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 KAT2AQ92830 837 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms