RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 C11orf91Q3C1V1 193 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 EFHC1Q5JVL4 640 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 AP1ARQ63HQ0 302 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 PDPK2PQ6A1A2 396 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 LCLAT1Q6UWP7 414 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 ARHGAP24Q8N264 748 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 SPATA6LQ8N4H0 392 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 OR6B3Q8NGW1 331 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 OR52B2Q96RD2 323 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 MYLKQ15746 1914 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 NDC80O14777 642 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 SPAG6O75602 509 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 CHRNGP07510 517 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 RAG1P15918 1043 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 ITGA7Q13683 1181 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 CNPY1Q3B7I2 92 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 LGSNQ5TDP6 509 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 GALNT15Q8N3T1 639 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 GDPD5Q8WTR4 605 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 MOCS1Q9NZB8 636 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 APOBEC2Q9Y235 224 aaKnown RBP10.87□□□□□ -0.67
SMC3-201ENST00000361804 TNFSF13BQ9Y275 285 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 PPP2R3BQ9Y5P8 575 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 NUP205Q92621 2012 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.87□□□□□ -0.67
SMC3-201ENST00000361804 CAPN8A6NHC0 703 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 ITGA2BP08514 1039 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 ITGAXP20702 1163 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 SLC6A3Q01959 620 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 GRAMD1BQ3KR37 738 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 TMEM198Q66K66 360 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 SATL1Q86VE3 508 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
SMC3-201ENST00000361804 OR52K1Q8NGK4 314 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 OR6Y1Q8NGX8 325 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 FAM149B1Q96BN6 582 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 RTP4Q96DX8 246 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 CDH22Q9UJ99 828 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 PTPRDP23468 1912 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 STX16-NPEPL1H3BU86 382 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 AIM2O14862 343 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 TXNP10599 105 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 TPH1P17752 444 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 TYK2P29597 1187 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 COPAP53621 1224 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 CELF3Q5SZQ8 465 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 C6orf163Q5TEZ5 329 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 DHDDSQ86SQ9 333 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 NME8Q8N427 588 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 SNX31Q8N9S9 440 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 FAM156AQ8NDB6 213 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMC3-201ENST00000361804 USP13Q92995 863 aaPredicted RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 KLK14Q9P0G3 267 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 FNDC1Q4ZHG4 1894 aaPredicted RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 PATJQ8NI35 1801 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 RNF103O00237 685 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 TRDMT1O14717 391 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 JUNP05412 331 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 TSHRP16473 764 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 TGM2P21980 687 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 GLRBP48167 497 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 PKNOX1P55347 436 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 WASHC5Q12768 1159 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 BOLA3Q53S33 107 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 PTAR1Q7Z6K3 402 aaPredicted RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 SNTG2Q9NY99 539 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 POMPQ9Y244 141 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 CLDN5O00501 218 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 ZNF195O14628 629 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 C22orf31O95567 290 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 TCN1P20061 433 aaPredicted RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 HTR3CQ8WXA8 447 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 OTUD5Q96G74 571 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 COG4Q9H9E3 785 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 SNX10Q9Y5X0 201 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 RPS6KL1Q9Y6S9 549 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 A0A1B0GTW7 788 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 F8W8V4 182 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 AOC1P19801 751 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 AKAP5P24588 427 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 CRABP2P29373 138 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 AVPR1AP37288 418 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 NDUFV1P49821 464 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 ROR2Q01974 943 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 TBL3Q12788 808 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 NME3Q13232 169 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 PDK2Q15119 407 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 KIZQ2M2Z5 673 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 DNAL1Q4LDG9 190 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 CHST13Q8NET6 341 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 P2RY11Q96G91 374 aa10.86□□□□□ -0.67
SMC3-201ENST00000361804 DNAJC1Q96KC8 554 aaKnown RBP10.86□□□□□ -0.67
SMC3-201ENST00000361804 FAM72CH0Y354 149 aa10.85□□□□□ -0.67
SMC3-201ENST00000361804 CFLARO15519 480 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms