RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CISHQ9NSE2 258 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 GID8Q9NWU2 228 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 POLIQ9UNA4 740 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 GPC6Q9Y625 555 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 ZBTB14O43829 449 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 KCNH1O95259 989 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 CDKN2BP42772 138 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 YAP1P46937 504 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 MS4A2Q01362 244 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 SH3PXD2AQ5TCZ1 1133 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 TMEM26Q6ZUK4 368 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 KYQ8NBH2 561 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 CATSPER1Q8NEC5 780 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 NPAS2Q99743 824 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 ADPGKQ9BRR6 497 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 NOL11Q9H8H0 719 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 NR3C2P08235 984 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 PHKA2P46019 1235 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 GCNT1Q02742 428 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 C15orf59Q2T9L4 293 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 SLC9B1Q4ZJI4 515 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 FGD3Q5JSP0 725 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 KCNT2Q6UVM3 1135 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 ZBTB49Q6ZSB9 765 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 DSELQ8IZU8 1212 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 WARS2Q9UGM6 360 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 ITGA11Q9UKX5 1188 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 A6NL46 340 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 M0QYV0 167 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 SLC26A4O43511 780 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 H6PDO95479 791 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 APOEP02649 317 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 CALB1P05937 261 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 RALBP11234 206 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 EEF1DP29692 281 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 RALGDSQ12967 914 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 DACT2Q5SW24 774 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 METTL21CQ5VZV1 264 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 ISOC1Q96CN7 298 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF778Q96MU6 729 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 POLR1BQ9H9Y6 1135 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
VAMP1-201ENST00000361716 PLIN4Q96Q06 1357 aa13.01□□□□□ -0.33
VAMP1-201ENST00000361716 PLOD2O00469 737 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 EXTL3O43909 919 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 RFPL1O75677 317 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 RNASEH2AO75792 299 aaKnown RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF182P17025 639 aaPredicted RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 TCEAL1Q15170 157 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 GALNT18Q6P9A2 607 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 OFCC1Q8IZS5 231 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 SIX5Q8N196 739 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 CCNYQ8ND76 341 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 OR52B2Q96RD2 323 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 NAA50Q9GZZ1 169 aaKnown RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 PCDH12Q9NPG4 1184 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 FADS3Q9Y5Q0 445 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 FAM149AA5PLN7 773 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 PRPSAP2O60256 369 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 MT-CO1P00395 513 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 POLR2BP30876 1174 aaKnown RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 CD151P48509 253 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 BCAR1P56945 870 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 RGS21Q2M5E4 152 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 LRRC8EQ6NSJ5 796 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF781Q8N8C0 355 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF696Q9H7X3 374 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 IL1RL2Q9HB29 575 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 TBCCD1Q9NVR7 557 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 ST14Q9Y5Y6 855 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 BTBD19C9JJ37 291 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 CFAP99D6REC4 459 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 TPP1O14773 563 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 ATE1O95260 518 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 GJB1P08034 283 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 IL1R2P27930 398 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 GTF2A2P52657 109 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 KRT76Q01546 638 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 EMC2Q15006 297 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 TEX44Q53QW1 395 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 RAB6CQ53S08 254 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 TEDDM1Q5T9Z0 273 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 DCDC5Q6ZRR9 648 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms