RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 SYCP2LQ5T4T6 812 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 FAXCQ5TGI0 409 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ZDHHC20Q5W0Z9 365 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PHTF1Q9UMS5 762 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 IFNA14P01570 189 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PBX1P40424 430 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 C6orf10Q5SRN2 563 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SEL1L3Q68CR1 1132 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PRMT9Q6P2P2 845 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PIGZQ86VD9 579 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 LNX1Q8TBB1 728 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 KLC4Q9NSK0 619 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 OR12D3Q9UGF7 316 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 DDX20Q9UHI6 824 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 USP17L7P0C7H9 530 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 COL6A1P12109 1028 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 AMPD1P23109 780 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 CCND1P24385 295 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PTPN7P35236 360 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 HIPK4Q8NE63 616 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ZSWIM2Q8NEG5 633 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PDGFDQ9GZP0 370 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 EVA1BQ9NVM1 165 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SERPINE1P05121 402 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■■□ 22.3
COL4A5-202ENST00000361603 PEX6Q13608 980 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 TMC3Q7Z5M5 1100 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 RNF157Q96PX1 679 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 TFR2Q9UP52 801 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 NFKBIEO00221 500 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 CD52P31358 61 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SERPINH1P50454 418 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SULT2A1Q06520 285 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SRLQ86TD4 932 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 HEXDCQ8WVB3 486 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 MCCC1Q96RQ3 725 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 WDR41Q9HAD4 459 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 EFCAB1Q9HAE3 211 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 TNPO3Q9Y5L0 923 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 AP5Z1O43299 807 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 SUPT7LO94864 414 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PIGRP01833 764 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 PTP4A2Q12974 167 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 MREGQ8N565 214 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 AENQ8WTP8 325 aaKnown RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 RNPEPQ9H4A4 650 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ZNF556Q9HAH1 456 aa11.67□□□□□ -0.54
COL4A5-202ENST00000361603 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-202ENST00000361603 CICQ96RK0 1608 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 DYRK3O43781 588 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 GLUD2P49448 558 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 KDSRQ06136 332 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 C2CD6Q53TS8 623 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 TTPALQ9BTX7 342 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 VPS51Q9UID3 782 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 DDHD2O94830 711 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 RXRGP48443 463 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 CSE1LP55060 971 aaKnown RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 PRKCQQ04759 706 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 CREG2Q8IUH2 290 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 CASP10Q92851 521 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 BMP10O95393 424 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 ALOX15P16050 662 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 ELK3P41970 407 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 SKP1P63208 163 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 SGCGQ13326 291 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 ACMSDQ8TDX5 336 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 FSCN2O14926 492 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 OCA2Q04671 838 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 PRPF39Q86UA1 669 aaKnown RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 LONP2Q86WA8 852 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms