RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 VCLP18206 1134 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 STIP1P31948 543 aaKnown RBP16.63■□□□□ 0.25
IFT140-201ENST00000361339 POU5F1BQ06416 359 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 RABGAP1LQ5R372 815 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 C9orf57Q5W0N0 161 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 KCNT2Q6UVM3 1135 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 RNF111Q6ZNA4 994 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 GPR142Q7Z601 462 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 PLXNA1Q9UIW2 1896 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 E2F8A0AVK6 867 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 TRPA1O75762 1119 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 AMHP03971 560 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 IMPDH2P12268 514 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 ETV4P43268 484 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 CCL15Q16663 113 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 BSPRYQ5W0U4 402 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 SLC9A4Q6AI14 798 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 DENND5BQ6ZUT9 1274 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 MAML3Q96JK9 1138 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 HAPLN3Q96S86 360 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 VTA1Q9NP79 307 aa16.63■□□□□ 0.25
IFT140-201ENST00000361339 DDX43Q9NXZ2 648 aaKnown RBP16.63■□□□□ 0.25
IFT140-201ENST00000361339 AFF1P51825 1210 aaKnown RBP16.62■□□□□ 0.25
IFT140-201ENST00000361339 ACTR3P61158 418 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 PDK3Q15120 406 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 ZBTB6Q15916 424 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 UNC5AQ6ZN44 842 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 TMCO1Q9UM00 188 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 AP4E1Q9UPM8 1137 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 PIN4Q9Y237 131 aaKnown RBP16.62■□□□□ 0.25
IFT140-201ENST00000361339 DOCK3Q8IZD9 2030 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 HMX2A2RU54 273 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 CAPN8A6NHC0 703 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 SLC15A5A6NIM6 579 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 TM7SF2O76062 418 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 CRABP2P29373 138 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 MROH9Q5TGP6 573 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 MAP7D3Q8IWC1 876 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 ADAM32Q8TC27 787 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 KLHL4Q9C0H6 718 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 TRIP12Q14669 1992 aaPredicted RBP16.62■□□□□ 0.25
IFT140-201ENST00000361339 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
IFT140-201ENST00000361339 SMIM10L2AP0DMW4 78 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 SMIM10L2BP0DMW5 78 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 MSLNQ13421 630 aaPredicted RBP16.62■□□□□ 0.25
IFT140-201ENST00000361339 BOLA3Q53S33 107 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 SLC27A1Q6PCB7 646 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 OSTM1Q86WC4 334 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 FAM149B1Q96BN6 582 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 ZFP42Q96MM3 310 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 FRMD8P1Q9BZ68 369 aaPredicted RBP16.62■□□□□ 0.25
IFT140-201ENST00000361339 VPS11Q9H270 941 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 PAK5Q9P286 719 aa16.62■□□□□ 0.25
IFT140-201ENST00000361339 CHADO15335 359 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 TREHO43280 583 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 MSX2P35548 267 aaPredicted RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 MRPS5P82675 430 aaKnown RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 BEX3Q00994 111 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 BST1Q10588 318 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 GK3PQ14409 553 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 PRKD1Q15139 912 aaPredicted RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 CHI3L2Q15782 390 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 TRMT5Q32P41 509 aaKnown RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 HSF5Q4G112 596 aaPredicted RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 FBXL19Q6PCT2 694 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 CES3Q6UWW8 571 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 NET1Q7Z628 596 aaPredicted RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 SDCCAG8Q86SQ7 713 aaPredicted RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 RSPH3Q86UC2 560 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 SHCBP1Q8NEM2 672 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 CSPG4P5Q96PW8 444 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 SRPK1Q96SB4 655 aaKnown RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 DTLQ9NZJ0 730 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 SMIM28A0A1B0GU29 152 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 I3L4J1 428 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 BUD23O43709 281 aaKnown RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 GTF2A2P52657 109 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 SLC18A1P54219 525 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 DUSP28Q4G0W2 176 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 DHDDSQ86SQ9 333 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 ZNF398Q8TD17 642 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 PTPN18Q99952 460 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 MAGED2Q9UNF1 606 aaPredicted RBP16.61■□□□□ 0.25
IFT140-201ENST00000361339 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
IFT140-201ENST00000361339 DPYSL4O14531 572 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 PABPC4LP0CB38 370 aaKnown RBP16.6■□□□□ 0.25
IFT140-201ENST00000361339 CYP2C9P11712 490 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 GNL1P36915 607 aaPredicted RBP16.6■□□□□ 0.25
IFT140-201ENST00000361339 NCBP2-AS2Q69YL0 99 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 PDSS2Q86YH6 399 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 NCSTNQ92542 709 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 APOPT1Q96IL0 206 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 CNBD2Q96M20 576 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 C20orf27Q9GZN8 174 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms