RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 INAVAQ3KP66 663 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 NADSYN1Q6IA69 706 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 PMF1Q6P1K2 205 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 LCLAT1Q6UWP7 414 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 DHX40Q8IX18 779 aaKnown RBP21.92■■□□□ 1.1
CD47-202ENST00000361309 PDCD7Q8N8D1 485 aaKnown RBP21.92■■□□□ 1.1
CD47-202ENST00000361309 ZNF557Q8N988 423 aaPredicted RBP21.92■■□□□ 1.1
CD47-202ENST00000361309 FIBINQ8TAL6 211 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 CLEC4CQ8WTT0 213 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 SLC35F5Q8WV83 523 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 TFAP2BQ92481 460 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 TTC17Q96AE7 1141 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 PRICKLE1Q96MT3 831 aaPredicted RBP21.92■■□□□ 1.1
CD47-202ENST00000361309 SLC6A18Q96N87 628 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 ACE2Q9BYF1 805 aaPredicted RBP21.92■■□□□ 1.1
CD47-202ENST00000361309 INTS6Q9UL03 887 aaKnown RBP21.92■■□□□ 1.1
CD47-202ENST00000361309 SCML1Q9UN30 329 aa21.92■■□□□ 1.1
CD47-202ENST00000361309 A0A1B0GTQ1 180 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 A0A1W2PPC4 97 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 A0A1W2PQ27 194 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 A0A1W2PQ64 194 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 SLC16A3O15427 465 aaKnown RBP21.91■■□□□ 1.1
CD47-202ENST00000361309 LTFP02788 710 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 TBXAS1P24557 533 aaPredicted RBP21.91■■□□□ 1.1
CD47-202ENST00000361309 PRCPP42785 496 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 HNRNPA1L2Q32P51 320 aaKnown RBP21.91■■□□□ 1.1
CD47-202ENST00000361309 PRAMEF14Q5SWL7 426 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 NCEH1Q6PIU2 408 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 TMEM270Q6UE05 265 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 HJURPQ8NCD3 748 aaPredicted RBP21.91■■□□□ 1.1
CD47-202ENST00000361309 IRGQQ8WZA9 623 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 AZIN2Q96A70 460 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 MYEOVQ96EZ4 313 aa21.91■■□□□ 1.1
CD47-202ENST00000361309 BBC3Q96PG8 261 aaPredicted RBP21.91■■□□□ 1.1
CD47-202ENST00000361309 ARID1BQ8NFD5 2236 aaPredicted RBP21.91■■□□□ 1.1
CD47-202ENST00000361309 A0A1W2PP55 124 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 MID1O15344 667 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 RNASEH1O60930 286 aaKnown RBP21.9■■□□□ 1.1
CD47-202ENST00000361309 RPS24P62847 133 aaKnown RBP21.9■■□□□ 1.1
CD47-202ENST00000361309 PNOCQ13519 176 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 CST6Q15828 149 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 ANKRD40Q6AI12 368 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 GATAD2AQ86YP4 633 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 SCUBE3Q8IX30 993 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 CARNMT1Q8N4J0 409 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 MRGPRX3Q96LB0 322 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 TSG101Q99816 390 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 ZSWIM1Q9BR11 485 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 NEUROG2Q9H2A3 272 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 EBF2Q9HAK2 575 aa21.9■■□□□ 1.1
CD47-202ENST00000361309 M0QYV0 167 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 ASLP04424 464 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 WNT1P04628 370 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 PAEPP09466 180 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 PMS1P54277 932 aaKnown RBP21.89■■□□□ 1.09
CD47-202ENST00000361309 FKBP3Q00688 224 aaKnown RBP21.89■■□□□ 1.09
CD47-202ENST00000361309 C9orf64Q5T6V5 341 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 MMS22LQ6ZRQ5 1243 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 MMAAQ8IVH4 418 aaKnown RBP21.89■■□□□ 1.09
CD47-202ENST00000361309 SLC35C1Q96A29 364 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 ELF4Q99607 663 aaPredicted RBP21.89■■□□□ 1.09
CD47-202ENST00000361309 PCDHB4Q9Y5E5 795 aa21.89■■□□□ 1.09
CD47-202ENST00000361309 A0A087WV48 116 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 TYW5A2RUC4 315 aaKnown RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 LRRC72A6NJI9 287 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 RNF225M0QZC1 329 aaPredicted RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 CBX4O00257 560 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 RNASEH2AO75792 299 aaKnown RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 CALCAP01258 141 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 CTSOP43234 321 aaPredicted RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 SFSWAPQ12872 951 aaKnown RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 CNGA2Q16280 664 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 FSCBQ5H9T9 825 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 TMPRSS12Q86WS5 348 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 SKA1Q96BD8 255 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 CRELD1Q96HD1 420 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 FCRL2Q96LA5 508 aaPredicted RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 OMDQ99983 421 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 DDX50Q9BQ39 737 aaKnown RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 SCAND2PQ9GZW5 306 aaPredicted RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 MIS12Q9H081 205 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 NUCKS1Q9H1E3 243 aaKnown RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 AASDHPPTQ9NRN7 309 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 RMND1Q9NWS8 449 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 ARMCX3Q9UH62 379 aaPredicted RBP21.88■■□□□ 1.09
CD47-202ENST00000361309 ERVW-1Q9UQF0 538 aa21.88■■□□□ 1.09
CD47-202ENST00000361309 TTC34A8MYJ7 566 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 PLK4O00444 970 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 ENC1O14682 589 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 FYNP06241 537 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 BRD2P25440 801 aaKnown RBP21.87■■□□□ 1.09
CD47-202ENST00000361309 CDH18Q13634 790 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 KCNJ12Q14500 433 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 ARID5BQ14865 1188 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 SHBQ15464 509 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 MS4A13Q5J8X5 152 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 PITRM1Q5JRX3 1037 aa21.87■■□□□ 1.09
CD47-202ENST00000361309 ZNF658Q5TYW1 1059 aaPredicted RBP21.87■■□□□ 1.09
CD47-202ENST00000361309 CCDC117Q8IWD4 279 aaPredicted RBP21.87■■□□□ 1.09
CD47-202ENST00000361309 CFAP52Q8N1V2 620 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms