RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 PPM1LQ5SGD2 360 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 RAP1GAP2Q684P5 730 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 NADSYN1Q6IA69 706 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 PLD4Q96BZ4 506 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 KLF16Q9BXK1 252 aaPredicted RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 TXLNGYQ9BZA5 131 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 MAN1C1Q9NR34 630 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 GKN1Q9NS71 199 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 MPP6Q9NZW5 540 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 PPARGC1AQ9UBK2 798 aaKnown RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 IGLV3-10A0A075B6K4 115 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 GALNT2Q10471 571 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 ACBD5Q5T8D3 534 aaPredicted RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 RNASEH2BQ5TBB1 312 aaKnown RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 HEATR6Q6AI08 1181 aaKnown RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 PDE12Q6L8Q7 609 aaKnown RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 RTL10Q7L3V2 364 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 ELMOD1Q8N336 334 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 HTR3CQ8WXA8 447 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 SLC22A12Q96S37 553 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 HPCAL4Q9UM19 191 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 WASH4PA8MWX3 477 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 NCAM2O15394 837 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 CCL16O15467 120 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 STC2O76061 302 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 IRAK1P51617 712 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 DHX9Q08211 1270 aaKnown RBP23.84■■□□□ 1.41
SDF4-202ENST00000360001 TXNDC8Q6A555 127 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 FBXL22Q6P050 247 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 NLRP14Q86W24 1093 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 RTL3Q8N8U3 475 aaKnown RBP23.84■■□□□ 1.41
SDF4-202ENST00000360001 VIPAS39Q9H9C1 493 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 CERS4Q9HA82 394 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 TRPC7Q9HCX4 862 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 NDFIP2Q9NV92 336 aa23.84■■□□□ 1.41
SDF4-202ENST00000360001 FARP1Q9Y4F1 1045 aaPredicted RBP23.84■■□□□ 1.41
SDF4-202ENST00000360001 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.83■■□□□ 1.41
SDF4-202ENST00000360001 PPFIA2O75334 1257 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 GCATO75600 419 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 OLFM2O95897 454 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 EPCAMP16422 314 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 HARS2P49590 506 aaKnown RBP23.83■■□□□ 1.41
SDF4-202ENST00000360001 AP1B1Q10567 949 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 LRRC31Q6UY01 552 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 MTERF4Q7Z6M4 381 aaKnown RBP23.83■■□□□ 1.41
SDF4-202ENST00000360001 ARHGAP12Q8IWW6 846 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CCNYQ8ND76 341 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 IGSF8Q969P0 613 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CELF6Q96J87 481 aaKnown RBP23.83■■□□□ 1.41
SDF4-202ENST00000360001 ZFRQ96KR1 1074 aaKnown RBP23.83■■□□□ 1.41
SDF4-202ENST00000360001 CYP2S1Q96SQ9 504 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 PAK5Q9P286 719 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 GOLGA6L7A0A1B0GV03 622 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 C5orf60A6NFR6 353 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 NRG2O14511 850 aaPredicted RBP23.83■■□□□ 1.41
SDF4-202ENST00000360001 ACSL4O60488 711 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 RFPL2O75678 378 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 MX2P20592 715 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CHKAP35790 457 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CYP4F8P98187 520 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 MORF4L2Q15014 288 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CCDC110Q8TBZ0 833 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CPT1BQ92523 772 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 HDAC11Q96DB2 347 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 P2RY11Q96G91 374 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 CORO1BQ9BR76 489 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 NKX2-4Q9H2Z4 354 aa23.83■■□□□ 1.41
SDF4-202ENST00000360001 TRANK1O15050 2925 aa23.83■■□□□ 1.4
SDF4-202ENST00000360001 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 DRGXA6NNA5 263 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 KLKB1P03952 638 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 RHOQP17081 205 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 ACTN2P35609 894 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 GARSP41250 739 aaKnown RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 PPIDQ08752 370 aaKnown RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 FAM133BQ5BKY9 247 aaKnown RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 CHSY1Q86X52 802 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 TAB3Q8N5C8 712 aaPredicted RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 LZTR1Q8N653 840 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 MRPS31Q92665 395 aaKnown RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 WBP2Q969T9 261 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 MYEOVQ96EZ4 313 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 ZYG11BQ9C0D3 744 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 BRD8Q9H0E9 1235 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 ASAH2Q9NR71 780 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 ATG2AQ2TAZ0 1938 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 PER2O15055 1255 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 MBL2P11226 248 aaPredicted RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 TACR2P21452 398 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 CORO1AP31146 461 aaKnown RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 SLC11A2P49281 568 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 UAP1Q16222 522 aaPredicted RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 ALFQ53S48 1182 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 AFMIDQ63HM1 303 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 PCGF5Q86SE9 256 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 ARL14EPQ8N8R7 260 aaPredicted RBP23.82■■□□□ 1.4
SDF4-202ENST00000360001 AZIN2Q96A70 460 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 DOCK6Q96HP0 2047 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 PWWP2AQ96N64 755 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms