RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NAB1Q13506 487 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 MBTPS1Q14703 1052 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 FAM182AQ5T1J6 154 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 ITPRIPL1Q6GPH6 555 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 ZNF280BQ86YH2 543 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 MPP5Q8N3R9 675 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 HAPLN3Q96S86 360 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 ZCWPW1Q9H0M4 648 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 HMX1Q9NP08 348 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 HAUS2Q9NVX0 235 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 KLHL14Q9P2G3 628 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 NR2E3Q9Y5X4 410 aa18.8■□□□□ 0.6
PDLIM7-203ENST00000359895 TRIM49D1C9J1S8 452 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 H0YHG0 523 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 TNFRSF10BO14763 440 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 ALDH1A2O94788 518 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 LRIG2O94898 1065 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 PGAM1P18669 254 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 EPHB2P29323 1055 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 GRIA1P42261 906 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 NEK3P51956 506 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 SLC5A3P53794 718 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 EIF4EBP2Q13542 120 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 NFE2Q16621 373 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 RNF43Q68DV7 783 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 SH2D5Q6ZV89 423 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 SLAIN1Q8ND83 568 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 TTC17Q96AE7 1141 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 SERAC1Q96JX3 654 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 SMOC2Q9H3U7 446 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 TBC1D13Q9NVG8 400 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 TMEM161AQ9NX61 479 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 MOCS1Q9NZB8 636 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 GRID1Q9ULK0 1009 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 PHTF1Q9UMS5 762 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 NUP205Q92621 2012 aa18.79■□□□□ 0.6
PDLIM7-203ENST00000359895 CXorf49A8MYA2 514 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 GOLGA8RI6L899 631 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 ARVCFO00192 962 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 SYN3O14994 580 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 EDF1O60869 148 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 AMHP03971 560 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 INHAP05111 366 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 HSPA8P11142 646 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 ADRA1DP25100 572 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 GARSP41250 739 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 SCTRP47872 440 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 OR1G1P47890 313 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 DNAJC3Q13217 504 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 SLC39A12Q504Y0 691 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 LHX8Q68G74 356 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 CGB2Q6NT52 195 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 ZNF449Q6P9G9 518 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 SCAMP5Q8TAC9 235 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 DEPDC1BQ8WUY9 529 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 ZNF75CPQ92670 426 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 CDKL2Q92772 493 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 MKS1Q9NXB0 559 aa18.78■□□□□ 0.6
PDLIM7-203ENST00000359895 WDR27A2RRH5 827 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 DNM1LO00429 736 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 FGF10O15520 208 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 PYGBP11216 843 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 SELPP16109 830 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 LBX1P52954 281 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 ARHGEF6Q15052 776 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 CASC4Q6P4E1 433 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 FAM47EQ6ZV65 393 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 MARK2Q7KZI7 788 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 LRRC8DQ7L1W4 858 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 CHSY1Q86X52 802 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 NPWQ8N729 165 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 KLF6Q99612 283 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 IQCGQ9H095 443 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 GBA3Q9H227 469 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 SMYD2Q9NRG4 433 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 VWA8A3KMH1 1905 aa18.77■□□□□ 0.6
PDLIM7-203ENST00000359895 F8W810 466 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 KCNK1O00180 336 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 COPEO14579 308 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 PSMD3O43242 534 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 B4GALT3O60512 393 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 DNAJC8O75937 253 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 AP2A1O95782 977 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 DHRS4L1P0CG22 281 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 MGAT1P26572 445 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CCR1P32246 355 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CCNFP41002 786 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 PPP2R5DQ14738 602 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TTC31Q49AM3 519 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SCN4BQ8IWT1 228 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TP53INP2Q8IXH6 220 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 ARHGAP18Q8N392 663 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 LZTR1Q8N653 840 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 NETO2Q8NC67 525 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 C8orf48Q96LL4 319 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CEP41Q9BYV8 373 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms