RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TAF13Q15543 124 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 TCP10LQ8TDR4 215 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 COQ7Q99807 217 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 MROH8Q9H579 483 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 NMRAL1Q9HBL8 299 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 SPG21Q9NZD8 308 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 BTN3A1O00481 513 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 GLI1P08151 1106 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 TSPAN19P0C672 248 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 GZMAP12544 262 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 PIK3R1P27986 724 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 HK2P52789 917 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 CACNA2D1P54289 1103 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 PRKAA1Q13131 559 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 PAPD7Q5XG87 772 aaKnown RBP18.74■□□□□ 0.59
SHANK1-202ENST00000359082 OVOS1Q6IE37 1185 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 KLHL24Q6TFL4 600 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 RNF148Q8N7C7 305 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 OR56A4Q8NGH8 313 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 BTBD10Q9BSF8 475 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 VTI1BQ9UEU0 232 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-202ENST00000359082 RBAK-RBAKDNI3L0D1 243 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 NCAM2O15394 837 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 SERPINF2P08697 491 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 FAM86B2P0C5J1 330 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 CRABP2P29373 138 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 PLD1Q13393 1074 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 TTI2Q6NXR4 508 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 MFSD7Q6UXD7 560 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 BDH2Q9BUT1 245 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 PCDH9Q9HC56 1237 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 PHGDHO43175 533 aaKnown RBP18.74■□□□□ 0.59
SHANK1-202ENST00000359082 OR6A2O95222 327 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 FGFR3P22607 806 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 RTL3Q8N8U3 475 aaKnown RBP18.74■□□□□ 0.59
SHANK1-202ENST00000359082 OR6Y1Q8NGX8 325 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 APOL4Q9BPW4 351 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 INO80Q9ULG1 1556 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-202ENST00000359082 ASNA1O43681 348 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 BMP10O95393 424 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 SERPINE1P05121 402 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 MYL12AP19105 171 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 HPCAL1P37235 193 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 ZNF470Q6ECI4 717 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 ZCCHC23Q6ZST2 131 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 HTR3CQ8WXA8 447 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 RHBGQ9H310 441 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 DDX20Q9UHI6 824 aaKnown RBP18.74■□□□□ 0.59
SHANK1-202ENST00000359082 HLA-DQA2P01906 255 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 CCR4P51679 360 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 APOPT1Q96IL0 206 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 DCUN1D5Q9BTE7 237 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 FANCEQ9HB96 536 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 CYLDQ9NQC7 956 aa18.74■□□□□ 0.59
SHANK1-202ENST00000359082 TOB1P50616 345 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-202ENST00000359082 GMCL1P1Q8NEA9 526 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 REPS1Q96D71 796 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SLITRK2Q9H156 845 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SEMA4AQ9H3S1 761 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 E9PCH4 1651 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 MOXD2PA6NHM9 499 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SNPHO15079 494 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 PRLRP16471 622 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 PGM5Q15124 567 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SIX5Q8N196 739 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 POU5F2Q8N7G0 328 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 PCSK9Q8NBP7 692 aaKnown RBP18.73■□□□□ 0.59
SHANK1-202ENST00000359082 TBCDQ9BTW9 1192 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 CLEC4MQ9H2X3 399 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-202ENST00000359082 POLLQ9UGP5 575 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 ACTL9Q8TC94 416 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 THG1LQ9NWX6 298 aaKnown RBP18.73■□□□□ 0.59
SHANK1-202ENST00000359082 CD163L1Q9NR16 1453 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 ZNF7P17097 686 aaPredicted RBP18.73■□□□□ 0.59
SHANK1-202ENST00000359082 GPR15P49685 360 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 FAM171A1Q5VUB5 890 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SCUBE3Q8IX30 993 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 PTPRUQ92729 1446 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 GAKO14976 1311 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 ISLR2Q6UXK2 745 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 ZNF621Q6ZSS3 439 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SLC5A5Q92911 643 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 SMARCD1Q96GM5 515 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 IGFLR1Q9H665 355 aa18.73■□□□□ 0.59
SHANK1-202ENST00000359082 PTGES3LE9PB15 166 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 RPL21P46778 160 aaKnown RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 MOXD1Q6UVY6 613 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 DET1Q7L5Y6 550 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 ZNF605Q86T29 641 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 NOL6Q9H6R4 1146 aaKnown RBP18.72■□□□□ 0.59
SHANK1-202ENST00000359082 MCM8Q9UJA3 840 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 EFCAB10A6NFE3 127 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 MRASO14807 208 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 RGL2O15211 777 aa18.72■□□□□ 0.59
SHANK1-202ENST00000359082 TROAPQ12815 778 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms