RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 H7C0S8 307 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GRAP2O75791 330 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ARHGAP8P85298 464 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ATG16L2Q8NAA4 619 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 NIF3L1Q9GZT8 377 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 SP140LQ9H930 580 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CYP4F12Q9HCS2 524 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CMTM6Q9NX76 183 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ADGRA2Q96PE1 1338 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GTF2H1P32780 548 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CSE1LP55060 971 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 LSM3P62310 102 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GALNTL6Q49A17 601 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 LRRC57Q8N9N7 239 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 DISP1Q96F81 1524 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 FAM92AA1XBS5 289 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 DFFAO00273 331 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PRPF4O43172 522 aaKnown RBP eCLIP6.2□□□□□ -1.424e-6■■■□□ 16.7
VPS13B-203ENST00000358544 BPGMP07738 259 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GSSP48637 474 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 RHAGQ02094 409 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 RBM20Q5T481 1227 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF544Q6NX49 715 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 LINC00523Q86TU6 105 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GATAD2AQ86YP4 633 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EID3Q8N140 333 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MIER2Q8N344 545 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ING3Q9NXR8 418 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EPN2O95208 641 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF284Q2VY69 593 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CENPSQ8N2Z9 138 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 RCN3Q96D15 328 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 NSMCE2Q96MF7 247 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PPM1HQ9ULR3 514 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PHF24Q9UPV7 400 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EIF3LQ9Y262 564 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PRKCIP41743 596 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MARCKSL1P49006 195 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MSLNQ13421 630 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MTMR2Q13614 643 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PPM1LQ5SGD2 360 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 KLHL35Q6PF15 583 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ARMCX2Q7L311 632 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF276Q8N554 614 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 RNF145Q96MT1 663 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GANQ9H2C0 597 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ENOPH1Q9UHY7 261 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 TRMT6Q9UJA5 497 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 LOC110117498-PIK3R3F6TDL0 507 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 OR2B6P58173 313 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 OSTNP61366 133 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 SCARF1Q14162 830 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PDK2Q15119 407 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ZC2HC1CQ53FD0 456 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MTX3Q5HYI7 312 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CYP2U1Q7Z449 544 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ADGRF4Q8IZF3 695 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ABRAQ8N0Z2 381 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MCFD2Q8NI22 146 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 SIPA1Q96FS4 1042 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PCDHA3Q9Y5H8 950 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 E5RI56 91 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ENTPD1P49961 510 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ANGPT1Q15389 498 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 KIZQ2M2Z5 673 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 TMEM119Q4V9L6 283 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 DENND1BQ6P3S1 775 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 STRA8Q7Z7C7 330 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CHST7Q9NS84 486 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EMC3Q9P0I2 261 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 TNPO2O14787 897 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 GRK3P35626 688 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 NUP62P37198 522 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EFNA5P52803 228 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF543Q08ER8 600 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 DENND6AQ8IWF6 608 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 C7orf31Q8N865 590 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 TFB1MQ8WVM0 346 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 KRT84Q9NSB2 600 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 MRPL39Q9NYK5 338 aaKnown RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EFCAB14O75071 495 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 CLPXO76031 633 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PTPN7P35236 360 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 POU4F1Q01851 419 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 BNIP3Q12983 259 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 SPDYAQ5MJ70 313 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF572Q7Z3I7 529 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 NECAB2Q7Z6G3 386 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PTAR1Q7Z6K3 402 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 OR6B3Q8NGW1 331 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 OR2T34Q8NGX1 318 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 OR2T3Q8NH03 318 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 HM13Q8TCT9 377 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 RNFT2Q96EX2 444 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 TMEM121Q9BTD3 319 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 RMND5AQ9H871 391 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 TOPORSQ9NS56 1045 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PCDHGB4Q9UN71 923 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 SNX7Q9UNH6 387 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 PLCL2Q9UPR0 1127 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms